Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
TREM2Q9NZC2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TREM2Q9NZC2 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
TREM2Q9NZC2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18■□□□□ 0.47
TREM2Q9NZC2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18■□□□□ 0.47
TREM2Q9NZC2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
TREM2Q9NZC2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18■□□□□ 0.47
TREM2Q9NZC2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18■□□□□ 0.47
TREM2Q9NZC2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TREM2Q9NZC2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC18■□□□□ 0.47
TREM2Q9NZC2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
TREM2Q9NZC2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TREM2Q9NZC2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18■□□□□ 0.47
TREM2Q9NZC2 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18■□□□□ 0.47
TREM2Q9NZC2 KRT19P1-201ENST00000405746 1186 ntBASIC18■□□□□ 0.47
TREM2Q9NZC2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18■□□□□ 0.47
TREM2Q9NZC2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
TREM2Q9NZC2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18■□□□□ 0.47
TREM2Q9NZC2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC18■□□□□ 0.47
TREM2Q9NZC2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18■□□□□ 0.47
TREM2Q9NZC2 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18■□□□□ 0.47
TREM2Q9NZC2 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
TREM2Q9NZC2 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TREM2Q9NZC2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TREM2Q9NZC2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18■□□□□ 0.47
TREM2Q9NZC2 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18■□□□□ 0.47
TREM2Q9NZC2 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 AC006015.1-201ENST00000429970 570 ntBASIC17.99■□□□□ 0.47
TREM2Q9NZC2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 AC080038.1-201ENST00000611274 1154 ntBASIC17.99■□□□□ 0.47
TREM2Q9NZC2 AC026310.3-201ENST00000625186 2373 ntBASIC17.99■□□□□ 0.47
TREM2Q9NZC2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TREM2Q9NZC2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.98■□□□□ 0.47
TREM2Q9NZC2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TREM2Q9NZC2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TREM2Q9NZC2 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.97■□□□□ 0.47
TREM2Q9NZC2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TREM2Q9NZC2 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.97■□□□□ 0.47
TREM2Q9NZC2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TREM2Q9NZC2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TREM2Q9NZC2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TREM2Q9NZC2 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.97■□□□□ 0.47
TREM2Q9NZC2 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC17.97■□□□□ 0.47
TREM2Q9NZC2 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.97■□□□□ 0.47
TREM2Q9NZC2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.97■□□□□ 0.47
TREM2Q9NZC2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TREM2Q9NZC2 AF106564.1-201ENST00000607058 2553 ntBASIC17.97■□□□□ 0.47
TREM2Q9NZC2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TREM2Q9NZC2 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TREM2Q9NZC2 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TREM2Q9NZC2 AC003102.1-202ENST00000563394 1796 ntBASIC17.96■□□□□ 0.47
TREM2Q9NZC2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TREM2Q9NZC2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.96■□□□□ 0.47
TREM2Q9NZC2 AL391422.3-201ENST00000603791 2761 ntBASIC17.96■□□□□ 0.47
TREM2Q9NZC2 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TREM2Q9NZC2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TREM2Q9NZC2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.96■□□□□ 0.47
TREM2Q9NZC2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC17.96■□□□□ 0.47
TREM2Q9NZC2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TREM2Q9NZC2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TREM2Q9NZC2 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TREM2Q9NZC2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TREM2Q9NZC2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TREM2Q9NZC2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TREM2Q9NZC2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms