Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 AC073314.1-201ENST00000568729 2216 ntBASIC19.89■□□□□ 0.77
PIF1Q9H611 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PIF1Q9H611 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PIF1Q9H611 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PIF1Q9H611 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.88■□□□□ 0.77
PIF1Q9H611 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PIF1Q9H611 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.88■□□□□ 0.77
PIF1Q9H611 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PIF1Q9H611 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
PIF1Q9H611 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PIF1Q9H611 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.88■□□□□ 0.77
PIF1Q9H611 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.88■□□□□ 0.77
PIF1Q9H611 MIR4466-201ENST00000606121 54 ntBASIC19.88■□□□□ 0.77
PIF1Q9H611 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PIF1Q9H611 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PIF1Q9H611 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
PIF1Q9H611 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
PIF1Q9H611 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PIF1Q9H611 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PIF1Q9H611 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.87■□□□□ 0.77
PIF1Q9H611 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PIF1Q9H611 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
PIF1Q9H611 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PIF1Q9H611 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.87■□□□□ 0.77
PIF1Q9H611 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PIF1Q9H611 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PIF1Q9H611 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PIF1Q9H611 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PIF1Q9H611 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PIF1Q9H611 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PIF1Q9H611 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.87■□□□□ 0.77
PIF1Q9H611 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PIF1Q9H611 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PIF1Q9H611 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PIF1Q9H611 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PIF1Q9H611 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.87■□□□□ 0.77
PIF1Q9H611 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PIF1Q9H611 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.86■□□□□ 0.77
PIF1Q9H611 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
PIF1Q9H611 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
PIF1Q9H611 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PIF1Q9H611 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PIF1Q9H611 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PIF1Q9H611 SERBP1P1-201ENST00000396021 1160 ntBASIC19.86■□□□□ 0.77
PIF1Q9H611 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PIF1Q9H611 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PIF1Q9H611 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.86■□□□□ 0.77
PIF1Q9H611 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PIF1Q9H611 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.86■□□□□ 0.77
PIF1Q9H611 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PIF1Q9H611 AC006128.1-201ENST00000624704 1661 ntBASIC19.86■□□□□ 0.77
PIF1Q9H611 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PIF1Q9H611 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PIF1Q9H611 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PIF1Q9H611 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PIF1Q9H611 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
PIF1Q9H611 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PIF1Q9H611 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PIF1Q9H611 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.85■□□□□ 0.77
PIF1Q9H611 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.85■□□□□ 0.77
PIF1Q9H611 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.85■□□□□ 0.77
PIF1Q9H611 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PIF1Q9H611 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PIF1Q9H611 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PIF1Q9H611 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PIF1Q9H611 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
PIF1Q9H611 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PIF1Q9H611 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PIF1Q9H611 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PIF1Q9H611 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PIF1Q9H611 AL138724.1-201ENST00000606771 1088 ntBASIC19.85■□□□□ 0.77
PIF1Q9H611 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.85■□□□□ 0.77
PIF1Q9H611 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.85■□□□□ 0.77
PIF1Q9H611 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PIF1Q9H611 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PIF1Q9H611 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.85■□□□□ 0.77
PIF1Q9H611 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
PIF1Q9H611 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
PIF1Q9H611 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PIF1Q9H611 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
PIF1Q9H611 AC008406.3-201ENST00000620001 1374 ntBASIC19.84■□□□□ 0.77
PIF1Q9H611 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PIF1Q9H611 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PIF1Q9H611 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PIF1Q9H611 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PIF1Q9H611 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PIF1Q9H611 SLC47A1P1-202ENST00000449666 945 ntBASIC19.84■□□□□ 0.77
PIF1Q9H611 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.84■□□□□ 0.77
PIF1Q9H611 AP006587.3-201ENST00000525742 1516 ntBASIC19.84■□□□□ 0.77
PIF1Q9H611 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PIF1Q9H611 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PIF1Q9H611 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
PIF1Q9H611 AL121603.2-201ENST00000557373 2117 ntBASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms