Protein–RNA interactions for Protein: Q9H3M0

KCNF1, Potassium voltage-gated channel subfamily F member 1, humanhuman

Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNF1Q9H3M0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC22.85■■□□□ 1.25
KCNF1Q9H3M0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
KCNF1Q9H3M0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.85■■□□□ 1.25
KCNF1Q9H3M0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
KCNF1Q9H3M0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
KCNF1Q9H3M0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
KCNF1Q9H3M0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.83■■□□□ 1.25
KCNF1Q9H3M0 AC125437.2-201ENST00000625180 2167 ntBASIC22.83■■□□□ 1.25
KCNF1Q9H3M0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
KCNF1Q9H3M0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.83■■□□□ 1.25
KCNF1Q9H3M0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
KCNF1Q9H3M0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
KCNF1Q9H3M0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
KCNF1Q9H3M0 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.83■■□□□ 1.25
KCNF1Q9H3M0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
KCNF1Q9H3M0 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC22.83■■□□□ 1.25
KCNF1Q9H3M0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.83■■□□□ 1.25
KCNF1Q9H3M0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.83■■□□□ 1.25
KCNF1Q9H3M0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.83■■□□□ 1.24
KCNF1Q9H3M0 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
KCNF1Q9H3M0 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
KCNF1Q9H3M0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
KCNF1Q9H3M0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
KCNF1Q9H3M0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
KCNF1Q9H3M0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC22.82■■□□□ 1.24
KCNF1Q9H3M0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
KCNF1Q9H3M0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
KCNF1Q9H3M0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.82■■□□□ 1.24
KCNF1Q9H3M0 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
KCNF1Q9H3M0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
KCNF1Q9H3M0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
KCNF1Q9H3M0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
KCNF1Q9H3M0 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
KCNF1Q9H3M0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
KCNF1Q9H3M0 NTF6A-201ENST00000591175 560 ntBASIC22.81■■□□□ 1.24
KCNF1Q9H3M0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
KCNF1Q9H3M0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
KCNF1Q9H3M0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC22.81■■□□□ 1.24
KCNF1Q9H3M0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC22.81■■□□□ 1.24
KCNF1Q9H3M0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
KCNF1Q9H3M0 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
KCNF1Q9H3M0 TCF3P1-201ENST00000423021 1937 ntBASIC22.8■■□□□ 1.24
KCNF1Q9H3M0 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC22.8■■□□□ 1.24
KCNF1Q9H3M0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
KCNF1Q9H3M0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
KCNF1Q9H3M0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
KCNF1Q9H3M0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
KCNF1Q9H3M0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.8■■□□□ 1.24
KCNF1Q9H3M0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
KCNF1Q9H3M0 HES6-204ENST00000409182 863 ntTSL 2 BASIC22.8■■□□□ 1.24
KCNF1Q9H3M0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
KCNF1Q9H3M0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.8■■□□□ 1.24
KCNF1Q9H3M0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.8■■□□□ 1.24
KCNF1Q9H3M0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.8■■□□□ 1.24
KCNF1Q9H3M0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.8■■□□□ 1.24
KCNF1Q9H3M0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.8■■□□□ 1.24
KCNF1Q9H3M0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
KCNF1Q9H3M0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
KCNF1Q9H3M0 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC22.79■■□□□ 1.24
KCNF1Q9H3M0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
KCNF1Q9H3M0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
KCNF1Q9H3M0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.79■■□□□ 1.24
KCNF1Q9H3M0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
KCNF1Q9H3M0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.79■■□□□ 1.24
KCNF1Q9H3M0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
KCNF1Q9H3M0 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
KCNF1Q9H3M0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
KCNF1Q9H3M0 FP700111.2-201ENST00000619190 1892 ntBASIC22.79■■□□□ 1.24
KCNF1Q9H3M0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.79■■□□□ 1.24
KCNF1Q9H3M0 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
KCNF1Q9H3M0 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
KCNF1Q9H3M0 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC22.79■■□□□ 1.24
KCNF1Q9H3M0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
KCNF1Q9H3M0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
KCNF1Q9H3M0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
KCNF1Q9H3M0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
KCNF1Q9H3M0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC22.78■■□□□ 1.24
KCNF1Q9H3M0 AP004607.7-201ENST00000527152 1677 ntBASIC22.78■■□□□ 1.24
KCNF1Q9H3M0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC22.78■■□□□ 1.24
KCNF1Q9H3M0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.78■■□□□ 1.24
KCNF1Q9H3M0 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms