Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMOQ99835 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC22.04■■□□□ 1.12
SMOQ99835 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMOQ99835 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMOQ99835 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.04■■□□□ 1.12
SMOQ99835 MAP2K4P1-201ENST00000438453 1195 ntBASIC22.04■■□□□ 1.12
SMOQ99835 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.04■■□□□ 1.12
SMOQ99835 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.04■■□□□ 1.12
SMOQ99835 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC22.04■■□□□ 1.12
SMOQ99835 AC005181.1-201ENST00000604782 1256 ntBASIC22.04■■□□□ 1.12
SMOQ99835 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMOQ99835 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMOQ99835 AC068338.2-201ENST00000563278 1430 ntBASIC22.04■■□□□ 1.12
SMOQ99835 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMOQ99835 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.04■■□□□ 1.12
SMOQ99835 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SMOQ99835 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SMOQ99835 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMOQ99835 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SMOQ99835 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMOQ99835 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC22.03■■□□□ 1.12
SMOQ99835 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
SMOQ99835 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.03■■□□□ 1.12
SMOQ99835 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.03■■□□□ 1.12
SMOQ99835 AC006970.2-201ENST00000450065 779 ntBASIC22.03■■□□□ 1.12
SMOQ99835 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SMOQ99835 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.03■■□□□ 1.12
SMOQ99835 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.03■■□□□ 1.12
SMOQ99835 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
SMOQ99835 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMOQ99835 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMOQ99835 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.03■■□□□ 1.12
SMOQ99835 Z98882.1-201ENST00000622160 2253 ntBASIC22.03■■□□□ 1.12
SMOQ99835 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
SMOQ99835 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.02■■□□□ 1.12
SMOQ99835 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.02■■□□□ 1.12
SMOQ99835 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
SMOQ99835 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
SMOQ99835 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.02■■□□□ 1.12
SMOQ99835 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
SMOQ99835 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.02■■□□□ 1.12
SMOQ99835 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.02■■□□□ 1.12
SMOQ99835 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SMOQ99835 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
SMOQ99835 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.02■■□□□ 1.11
SMOQ99835 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SMOQ99835 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
SMOQ99835 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMOQ99835 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22.01■■□□□ 1.11
SMOQ99835 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SMOQ99835 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
SMOQ99835 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMOQ99835 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMOQ99835 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMOQ99835 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMOQ99835 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.01■■□□□ 1.11
SMOQ99835 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
SMOQ99835 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
SMOQ99835 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22■■□□□ 1.11
SMOQ99835 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22■■□□□ 1.11
SMOQ99835 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMOQ99835 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMOQ99835 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22■■□□□ 1.11
SMOQ99835 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMOQ99835 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22■■□□□ 1.11
SMOQ99835 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMOQ99835 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMOQ99835 NCF1B-203ENST00000435988 1254 ntBASIC22■■□□□ 1.11
SMOQ99835 AC245052.3-201ENST00000450182 901 ntBASIC22■■□□□ 1.11
SMOQ99835 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
SMOQ99835 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
SMOQ99835 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22■■□□□ 1.11
SMOQ99835 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
SMOQ99835 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC22■■□□□ 1.11
SMOQ99835 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMOQ99835 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
SMOQ99835 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.99■■□□□ 1.11
SMOQ99835 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMOQ99835 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
SMOQ99835 ID1-201ENST00000376105 1233 ntBASIC21.99■■□□□ 1.11
SMOQ99835 AC091799.1-201ENST00000422823 811 ntBASIC21.99■■□□□ 1.11
SMOQ99835 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.99■■□□□ 1.11
SMOQ99835 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.99■■□□□ 1.11
SMOQ99835 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SMOQ99835 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.98■■□□□ 1.11
SMOQ99835 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
SMOQ99835 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SMOQ99835 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMOQ99835 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMOQ99835 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SMOQ99835 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SMOQ99835 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMOQ99835 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.98■■□□□ 1.11
SMOQ99835 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.98■■□□□ 1.11
SMOQ99835 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.98■■□□□ 1.11
SMOQ99835 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.98■■□□□ 1.11
SMOQ99835 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.98■■□□□ 1.11
SMOQ99835 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.98■■□□□ 1.11
SMOQ99835 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SMOQ99835 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms