Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LRCH3Q96II8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC22.77■■□□□ 1.24
LRCH3Q96II8 POM121L13P-201ENST00000422362 380 ntBASIC22.77■■□□□ 1.24
LRCH3Q96II8 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.77■■□□□ 1.24
LRCH3Q96II8 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.77■■□□□ 1.24
LRCH3Q96II8 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
LRCH3Q96II8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
LRCH3Q96II8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.77■■□□□ 1.24
LRCH3Q96II8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.77■■□□□ 1.24
LRCH3Q96II8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
LRCH3Q96II8 AC079630.1-202ENST00000618127 1840 ntBASIC22.77■■□□□ 1.24
LRCH3Q96II8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
LRCH3Q96II8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
LRCH3Q96II8 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
LRCH3Q96II8 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC22.76■■□□□ 1.23
LRCH3Q96II8 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.76■■□□□ 1.23
LRCH3Q96II8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC22.76■■□□□ 1.23
LRCH3Q96II8 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.76■■□□□ 1.23
LRCH3Q96II8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
LRCH3Q96II8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC22.76■■□□□ 1.23
LRCH3Q96II8 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
LRCH3Q96II8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
LRCH3Q96II8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.76■■□□□ 1.23
LRCH3Q96II8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
LRCH3Q96II8 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
LRCH3Q96II8 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.76■■□□□ 1.23
LRCH3Q96II8 AC133561.1-201ENST00000568600 2415 ntBASIC22.76■■□□□ 1.23
LRCH3Q96II8 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
LRCH3Q96II8 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LRCH3Q96II8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
LRCH3Q96II8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LRCH3Q96II8 AC005521.1-201ENST00000393351 872 ntBASIC22.75■■□□□ 1.23
LRCH3Q96II8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.75■■□□□ 1.23
LRCH3Q96II8 LY6E-205ENST00000519611 635 ntTSL 3 BASIC22.75■■□□□ 1.23
LRCH3Q96II8 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
LRCH3Q96II8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC22.75■■□□□ 1.23
LRCH3Q96II8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC22.75■■□□□ 1.23
LRCH3Q96II8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC22.75■■□□□ 1.23
LRCH3Q96II8 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.75■■□□□ 1.23
LRCH3Q96II8 P4HB-223ENST00000576390 439 ntTSL 4 BASIC22.75■■□□□ 1.23
LRCH3Q96II8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC22.75■■□□□ 1.23
LRCH3Q96II8 AC124016.1-201ENST00000609552 612 ntBASIC22.75■■□□□ 1.23
LRCH3Q96II8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
LRCH3Q96II8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.75■■□□□ 1.23
LRCH3Q96II8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
LRCH3Q96II8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
LRCH3Q96II8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
LRCH3Q96II8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LRCH3Q96II8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.74■■□□□ 1.23
LRCH3Q96II8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
LRCH3Q96II8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LRCH3Q96II8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
LRCH3Q96II8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.74■■□□□ 1.23
LRCH3Q96II8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC22.74■■□□□ 1.23
LRCH3Q96II8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC22.74■■□□□ 1.23
LRCH3Q96II8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LRCH3Q96II8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.74■■□□□ 1.23
LRCH3Q96II8 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
LRCH3Q96II8 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC22.74■■□□□ 1.23
LRCH3Q96II8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LRCH3Q96II8 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.74■■□□□ 1.23
LRCH3Q96II8 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC22.74■■□□□ 1.23
LRCH3Q96II8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
LRCH3Q96II8 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
LRCH3Q96II8 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LRCH3Q96II8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LRCH3Q96II8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC22.74■■□□□ 1.23
LRCH3Q96II8 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
LRCH3Q96II8 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
LRCH3Q96II8 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRCH3Q96II8 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRCH3Q96II8 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.73■■□□□ 1.23
LRCH3Q96II8 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.73■■□□□ 1.23
LRCH3Q96II8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRCH3Q96II8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRCH3Q96II8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC22.73■■□□□ 1.23
LRCH3Q96II8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC22.73■■□□□ 1.23
LRCH3Q96II8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.73■■□□□ 1.23
LRCH3Q96II8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.73■■□□□ 1.23
LRCH3Q96II8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC22.73■■□□□ 1.23
LRCH3Q96II8 AC005363.2-201ENST00000618631 242 ntBASIC22.73■■□□□ 1.23
LRCH3Q96II8 AL023875.1-201ENST00000640777 796 ntBASIC22.73■■□□□ 1.23
LRCH3Q96II8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
LRCH3Q96II8 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC22.73■■□□□ 1.23
LRCH3Q96II8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
LRCH3Q96II8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.73■■□□□ 1.23
LRCH3Q96II8 AL135905.2-201ENST00000584934 1404 ntBASIC22.73■■□□□ 1.23
LRCH3Q96II8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
LRCH3Q96II8 AP004607.7-201ENST00000527152 1677 ntBASIC22.72■■□□□ 1.23
LRCH3Q96II8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRCH3Q96II8 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRCH3Q96II8 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRCH3Q96II8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.72■■□□□ 1.23
LRCH3Q96II8 MMP23A-201ENST00000234610 1017 ntBASIC22.72■■□□□ 1.23
LRCH3Q96II8 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.72■■□□□ 1.23
LRCH3Q96II8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.72■■□□□ 1.23
LRCH3Q96II8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.72■■□□□ 1.23
LRCH3Q96II8 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC22.72■■□□□ 1.23
LRCH3Q96II8 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
LRCH3Q96II8 MIR6786-201ENST00000616843 113 ntBASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms