Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.2■□□□□ 0.66
CHD6Q8TD26 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.2■□□□□ 0.66
CHD6Q8TD26 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.2■□□□□ 0.66
CHD6Q8TD26 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD6Q8TD26 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD6Q8TD26 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD6Q8TD26 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CHD6Q8TD26 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.2■□□□□ 0.66
CHD6Q8TD26 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CHD6Q8TD26 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
CHD6Q8TD26 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CHD6Q8TD26 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHD6Q8TD26 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.19■□□□□ 0.66
CHD6Q8TD26 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD6Q8TD26 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.19■□□□□ 0.66
CHD6Q8TD26 AC135731.1-201ENST00000569415 2548 ntBASIC19.19■□□□□ 0.66
CHD6Q8TD26 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
CHD6Q8TD26 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHD6Q8TD26 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CHD6Q8TD26 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CHD6Q8TD26 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CHD6Q8TD26 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.19■□□□□ 0.66
CHD6Q8TD26 REXO1L10P-201ENST00000615707 1290 ntBASIC19.19■□□□□ 0.66
CHD6Q8TD26 HLA-L-211ENST00000482052 1765 ntBASIC19.19■□□□□ 0.66
CHD6Q8TD26 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.19■□□□□ 0.66
CHD6Q8TD26 AC087633.2-202ENST00000565166 1439 ntBASIC19.19■□□□□ 0.66
CHD6Q8TD26 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.18■□□□□ 0.66
CHD6Q8TD26 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.18■□□□□ 0.66
CHD6Q8TD26 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
CHD6Q8TD26 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.18■□□□□ 0.66
CHD6Q8TD26 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHD6Q8TD26 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD6Q8TD26 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD6Q8TD26 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.17■□□□□ 0.66
CHD6Q8TD26 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.17■□□□□ 0.66
CHD6Q8TD26 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHD6Q8TD26 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHD6Q8TD26 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.17■□□□□ 0.66
CHD6Q8TD26 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD6Q8TD26 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.17■□□□□ 0.66
CHD6Q8TD26 NUDT16P1-203ENST00000513809 620 ntBASIC19.17■□□□□ 0.66
CHD6Q8TD26 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.17■□□□□ 0.66
CHD6Q8TD26 CR769767.2-201ENST00000622735 460 ntBASIC19.17■□□□□ 0.66
CHD6Q8TD26 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD6Q8TD26 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CHD6Q8TD26 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD6Q8TD26 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHD6Q8TD26 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHD6Q8TD26 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD6Q8TD26 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHD6Q8TD26 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD6Q8TD26 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHD6Q8TD26 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CHD6Q8TD26 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.16■□□□□ 0.66
CHD6Q8TD26 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD6Q8TD26 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD6Q8TD26 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.16■□□□□ 0.66
CHD6Q8TD26 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD6Q8TD26 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.16■□□□□ 0.66
CHD6Q8TD26 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHD6Q8TD26 AC110285.5-201ENST00000611501 352 ntBASIC19.16■□□□□ 0.66
CHD6Q8TD26 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD6Q8TD26 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.16■□□□□ 0.66
CHD6Q8TD26 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHD6Q8TD26 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.16■□□□□ 0.66
CHD6Q8TD26 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHD6Q8TD26 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.15■□□□□ 0.66
CHD6Q8TD26 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.15■□□□□ 0.66
CHD6Q8TD26 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.15■□□□□ 0.66
CHD6Q8TD26 AL390955.1-201ENST00000428694 934 ntBASIC19.15■□□□□ 0.66
CHD6Q8TD26 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD6Q8TD26 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD6Q8TD26 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.15■□□□□ 0.66
CHD6Q8TD26 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.15■□□□□ 0.66
CHD6Q8TD26 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHD6Q8TD26 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
CHD6Q8TD26 KRASP1-201ENST00000407852 552 ntBASIC19.15■□□□□ 0.66
CHD6Q8TD26 FAM197Y1-201ENST00000421178 764 ntBASIC19.15■□□□□ 0.66
CHD6Q8TD26 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CHD6Q8TD26 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHD6Q8TD26 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms