Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01006Q8NI28 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01006Q8NI28 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01006Q8NI28 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.34■□□□□ 0.21
LINC01006Q8NI28 MCRIP2P1-201ENST00000394346 511 ntBASIC16.34■□□□□ 0.21
LINC01006Q8NI28 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.34■□□□□ 0.21
LINC01006Q8NI28 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LINC01006Q8NI28 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LINC01006Q8NI28 AC060766.5-201ENST00000590539 871 ntBASIC16.34■□□□□ 0.21
LINC01006Q8NI28 HLA-B-256ENST00000639848 1089 ntBASIC16.34■□□□□ 0.21
LINC01006Q8NI28 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
LINC01006Q8NI28 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
LINC01006Q8NI28 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.34■□□□□ 0.21
LINC01006Q8NI28 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
LINC01006Q8NI28 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
LINC01006Q8NI28 AC010542.4-201ENST00000563151 1910 ntBASIC16.33■□□□□ 0.21
LINC01006Q8NI28 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 RPS2P4-201ENST00000476944 856 ntBASIC16.33■□□□□ 0.2
LINC01006Q8NI28 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 AC127496.7-201ENST00000625110 1798 ntBASIC16.33■□□□□ 0.2
LINC01006Q8NI28 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LINC01006Q8NI28 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01006Q8NI28 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01006Q8NI28 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01006Q8NI28 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01006Q8NI28 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01006Q8NI28 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC01006Q8NI28 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.32■□□□□ 0.2
LINC01006Q8NI28 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC01006Q8NI28 UNC93B4-201ENST00000505679 747 ntBASIC16.32■□□□□ 0.2
LINC01006Q8NI28 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01006Q8NI28 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.32■□□□□ 0.2
LINC01006Q8NI28 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LINC01006Q8NI28 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC01006Q8NI28 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.32■□□□□ 0.2
LINC01006Q8NI28 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.32■□□□□ 0.2
LINC01006Q8NI28 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
LINC01006Q8NI28 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 KRT18P68-201ENST00000392293 1000 ntBASIC16.31■□□□□ 0.2
LINC01006Q8NI28 SAPCD2P1-201ENST00000395413 1184 ntBASIC16.31■□□□□ 0.2
LINC01006Q8NI28 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 C1orf229-201ENST00000623686 2258 ntBASIC16.31■□□□□ 0.2
LINC01006Q8NI28 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LINC01006Q8NI28 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 AC068473.5-201ENST00000616428 2072 ntBASIC16.3■□□□□ 0.2
LINC01006Q8NI28 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 AC007322.3-201ENST00000426526 701 ntBASIC16.3■□□□□ 0.2
LINC01006Q8NI28 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 AC008403.3-201ENST00000598924 454 ntBASIC16.3■□□□□ 0.2
LINC01006Q8NI28 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
LINC01006Q8NI28 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms