Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PNMA1Q8ND90 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC24.42■■□□□ 1.5
PNMA1Q8ND90 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
PNMA1Q8ND90 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
PNMA1Q8ND90 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
PNMA1Q8ND90 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
PNMA1Q8ND90 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
PNMA1Q8ND90 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
PNMA1Q8ND90 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PNMA1Q8ND90 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.41■■□□□ 1.5
PNMA1Q8ND90 AC007322.4-201ENST00000509611 723 ntBASIC24.41■■□□□ 1.5
PNMA1Q8ND90 TK2-208ENST00000545043 1120 ntTSL 2 BASIC24.41■■□□□ 1.5
PNMA1Q8ND90 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.41■■□□□ 1.5
PNMA1Q8ND90 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC24.41■■□□□ 1.5
PNMA1Q8ND90 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
PNMA1Q8ND90 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
PNMA1Q8ND90 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC24.41■■□□□ 1.5
PNMA1Q8ND90 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
PNMA1Q8ND90 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
PNMA1Q8ND90 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC24.41■■□□□ 1.5
PNMA1Q8ND90 DYM-203ENST00000442713 2147 ntTSL 2 BASIC24.41■■□□□ 1.5
PNMA1Q8ND90 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PNMA1Q8ND90 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
PNMA1Q8ND90 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
PNMA1Q8ND90 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PNMA1Q8ND90 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
PNMA1Q8ND90 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.4■■□□□ 1.5
PNMA1Q8ND90 Z98882.1-201ENST00000622160 2253 ntBASIC24.4■■□□□ 1.5
PNMA1Q8ND90 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.4■■□□□ 1.5
PNMA1Q8ND90 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC24.4■■□□□ 1.5
PNMA1Q8ND90 AC006970.2-201ENST00000450065 779 ntBASIC24.4■■□□□ 1.5
PNMA1Q8ND90 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PNMA1Q8ND90 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.4■■□□□ 1.5
PNMA1Q8ND90 AC005181.1-201ENST00000604782 1256 ntBASIC24.4■■□□□ 1.5
PNMA1Q8ND90 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
PNMA1Q8ND90 AL050303.2-201ENST00000619798 666 ntBASIC24.4■■□□□ 1.5
PNMA1Q8ND90 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
PNMA1Q8ND90 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
PNMA1Q8ND90 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC24.4■■□□□ 1.5
PNMA1Q8ND90 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.5
PNMA1Q8ND90 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
PNMA1Q8ND90 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
PNMA1Q8ND90 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.39■■□□□ 1.49
PNMA1Q8ND90 AC245052.3-201ENST00000450182 901 ntBASIC24.39■■□□□ 1.49
PNMA1Q8ND90 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PNMA1Q8ND90 PLLP-204ENST00000569059 665 ntTSL 3 BASIC24.39■■□□□ 1.49
PNMA1Q8ND90 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.39■■□□□ 1.49
PNMA1Q8ND90 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC24.39■■□□□ 1.49
PNMA1Q8ND90 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC24.39■■□□□ 1.49
PNMA1Q8ND90 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC24.39■■□□□ 1.49
PNMA1Q8ND90 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
PNMA1Q8ND90 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
PNMA1Q8ND90 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 AC068338.2-201ENST00000563278 1430 ntBASIC24.38■■□□□ 1.49
PNMA1Q8ND90 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC24.38■■□□□ 1.49
PNMA1Q8ND90 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PNMA1Q8ND90 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.37■■□□□ 1.49
PNMA1Q8ND90 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC24.37■■□□□ 1.49
PNMA1Q8ND90 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC24.37■■□□□ 1.49
PNMA1Q8ND90 GXYLT1P5-201ENST00000614548 1189 ntBASIC24.37■■□□□ 1.49
PNMA1Q8ND90 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
PNMA1Q8ND90 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.37■■□□□ 1.49
PNMA1Q8ND90 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
PNMA1Q8ND90 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
PNMA1Q8ND90 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC24.37■■□□□ 1.49
PNMA1Q8ND90 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.36■■□□□ 1.49
PNMA1Q8ND90 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
PNMA1Q8ND90 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC24.36■■□□□ 1.49
PNMA1Q8ND90 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
PNMA1Q8ND90 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC24.36■■□□□ 1.49
PNMA1Q8ND90 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC24.36■■□□□ 1.49
PNMA1Q8ND90 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
PNMA1Q8ND90 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC24.35■■□□□ 1.49
PNMA1Q8ND90 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
PNMA1Q8ND90 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PNMA1Q8ND90 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
PNMA1Q8ND90 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
PNMA1Q8ND90 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
PNMA1Q8ND90 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
PNMA1Q8ND90 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC24.35■■□□□ 1.49
PNMA1Q8ND90 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms