Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 MIR935-201ENST00000401179 91 ntBASIC21.44■■□□□ 1.02
ATPAF2Q8N5M1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
ATPAF2Q8N5M1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.44■■□□□ 1.02
ATPAF2Q8N5M1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATPAF2Q8N5M1 AL137060.1-201ENST00000618151 2648 ntBASIC21.44■■□□□ 1.02
ATPAF2Q8N5M1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATPAF2Q8N5M1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
ATPAF2Q8N5M1 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
ATPAF2Q8N5M1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.44■■□□□ 1.02
ATPAF2Q8N5M1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.44■■□□□ 1.02
ATPAF2Q8N5M1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
ATPAF2Q8N5M1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
ATPAF2Q8N5M1 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
ATPAF2Q8N5M1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATPAF2Q8N5M1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATPAF2Q8N5M1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATPAF2Q8N5M1 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
ATPAF2Q8N5M1 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.43■■□□□ 1.02
ATPAF2Q8N5M1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
ATPAF2Q8N5M1 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.43■■□□□ 1.02
ATPAF2Q8N5M1 AC005229.4-201ENST00000610085 2198 ntBASIC21.43■■□□□ 1.02
ATPAF2Q8N5M1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 KRT16P2-201ENST00000414673 1423 ntBASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 KRT18P5-201ENST00000436075 1291 ntBASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
ATPAF2Q8N5M1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATPAF2Q8N5M1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATPAF2Q8N5M1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATPAF2Q8N5M1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATPAF2Q8N5M1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.41■■□□□ 1.02
ATPAF2Q8N5M1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
ATPAF2Q8N5M1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATPAF2Q8N5M1 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATPAF2Q8N5M1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.41■■□□□ 1.02
ATPAF2Q8N5M1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATPAF2Q8N5M1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
ATPAF2Q8N5M1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.41■■□□□ 1.02
ATPAF2Q8N5M1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.41■■□□□ 1.02
ATPAF2Q8N5M1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
ATPAF2Q8N5M1 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATPAF2Q8N5M1 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATPAF2Q8N5M1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.4■■□□□ 1.02
ATPAF2Q8N5M1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATPAF2Q8N5M1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
ATPAF2Q8N5M1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATPAF2Q8N5M1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.4■■□□□ 1.02
ATPAF2Q8N5M1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.4■■□□□ 1.02
ATPAF2Q8N5M1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATPAF2Q8N5M1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATPAF2Q8N5M1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
ATPAF2Q8N5M1 AL049796.1-201ENST00000565336 1766 ntBASIC21.4■■□□□ 1.02
ATPAF2Q8N5M1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
ATPAF2Q8N5M1 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
ATPAF2Q8N5M1 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.4■■□□□ 1.02
ATPAF2Q8N5M1 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
ATPAF2Q8N5M1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.39■■□□□ 1.02
ATPAF2Q8N5M1 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
ATPAF2Q8N5M1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
ATPAF2Q8N5M1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 AL162430.1-201ENST00000480705 870 ntBASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 KRT18P20-201ENST00000548986 1279 ntBASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 SLC7A5P2-201ENST00000553010 536 ntBASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
ATPAF2Q8N5M1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.38■■□□□ 1.01
ATPAF2Q8N5M1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms