Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CDCA4P2-201ENST00000441182 718 ntBASIC18.39■□□□□ 0.54
RTTNQ86VV8 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTTNQ86VV8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTTNQ86VV8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTTNQ86VV8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
RTTNQ86VV8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
RTTNQ86VV8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RTTNQ86VV8 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTTNQ86VV8 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.39■□□□□ 0.53
RTTNQ86VV8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.39■□□□□ 0.53
RTTNQ86VV8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTTNQ86VV8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.39■□□□□ 0.53
RTTNQ86VV8 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.39■□□□□ 0.53
RTTNQ86VV8 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTTNQ86VV8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTTNQ86VV8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RTTNQ86VV8 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.39■□□□□ 0.53
RTTNQ86VV8 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTTNQ86VV8 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTTNQ86VV8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTTNQ86VV8 NTF6G-201ENST00000591094 616 ntBASIC18.38■□□□□ 0.53
RTTNQ86VV8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTTNQ86VV8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTTNQ86VV8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.38■□□□□ 0.53
RTTNQ86VV8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTTNQ86VV8 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTTNQ86VV8 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.38■□□□□ 0.53
RTTNQ86VV8 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.38■□□□□ 0.53
RTTNQ86VV8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTTNQ86VV8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTTNQ86VV8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTTNQ86VV8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTTNQ86VV8 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTTNQ86VV8 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTTNQ86VV8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RTTNQ86VV8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTTNQ86VV8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTTNQ86VV8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTTNQ86VV8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.37■□□□□ 0.53
RTTNQ86VV8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.37■□□□□ 0.53
RTTNQ86VV8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.37■□□□□ 0.53
RTTNQ86VV8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.37■□□□□ 0.53
RTTNQ86VV8 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTTNQ86VV8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RTTNQ86VV8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTTNQ86VV8 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.37■□□□□ 0.53
RTTNQ86VV8 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
RTTNQ86VV8 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTTNQ86VV8 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTTNQ86VV8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
RTTNQ86VV8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.37■□□□□ 0.53
RTTNQ86VV8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTTNQ86VV8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTTNQ86VV8 KRT87P-202ENST00000534226 1464 ntBASIC18.37■□□□□ 0.53
RTTNQ86VV8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTTNQ86VV8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTTNQ86VV8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.37■□□□□ 0.53
RTTNQ86VV8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
RTTNQ86VV8 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.36■□□□□ 0.53
RTTNQ86VV8 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.36■□□□□ 0.53
RTTNQ86VV8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTTNQ86VV8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTTNQ86VV8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTTNQ86VV8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTTNQ86VV8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTTNQ86VV8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
RTTNQ86VV8 EEF1DP3-203ENST00000566025 782 ntBASIC18.36■□□□□ 0.53
RTTNQ86VV8 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.36■□□□□ 0.53
RTTNQ86VV8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.36■□□□□ 0.53
RTTNQ86VV8 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.36■□□□□ 0.53
RTTNQ86VV8 AC104187.1-201ENST00000607510 612 ntBASIC18.36■□□□□ 0.53
RTTNQ86VV8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTTNQ86VV8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTTNQ86VV8 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.36■□□□□ 0.53
RTTNQ86VV8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTTNQ86VV8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTTNQ86VV8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTTNQ86VV8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTTNQ86VV8 AL157384.1-201ENST00000445995 2473 ntBASIC18.36■□□□□ 0.53
RTTNQ86VV8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
RTTNQ86VV8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTTNQ86VV8 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTTNQ86VV8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RTTNQ86VV8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTTNQ86VV8 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.35■□□□□ 0.53
RTTNQ86VV8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.35■□□□□ 0.53
RTTNQ86VV8 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.35■□□□□ 0.53
RTTNQ86VV8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RTTNQ86VV8 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.35■□□□□ 0.53
RTTNQ86VV8 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.35■□□□□ 0.53
RTTNQ86VV8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.35■□□□□ 0.53
RTTNQ86VV8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTTNQ86VV8 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTTNQ86VV8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTTNQ86VV8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTTNQ86VV8 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTTNQ86VV8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTTNQ86VV8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
RTTNQ86VV8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTTNQ86VV8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms