Protein–RNA interactions for Protein: Q86U42

PABPN1, Polyadenylate-binding protein 2, humanhuman

Known RBP eCLIP

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1Q86U42 POLG-217ENST00000636774 4151 ntTSL 518.74■□□□□ 0.596e-6■■□□□ 12.8
PABPN1Q86U42 CDCA7-208ENST00000496441 2943 ntTSL 218.6■□□□□ 0.576e-6■■□□□ 12.8
PABPN1Q86U42 ANAPC5-207ENST00000535472 1048 ntTSL 518.09■□□□□ 0.496e-6■■□□□ 12.8
PABPN1Q86U42 ANAPC5-221ENST00000545218 1328 ntTSL 517.36■□□□□ 0.376e-6■■□□□ 12.8
PABPN1Q86U42 GALM-201ENST00000272252 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.336e-6■■□□□ 12.8
PABPN1Q86U42 TIMELESS-205ENST00000557589 2784 ntTSL 216.36■□□□□ 0.216e-6■■□□□ 12.8
PABPN1Q86U42 TIMELESS-201ENST00000229201 4376 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.166e-6■■□□□ 12.8
PABPN1Q86U42 MDC1-201ENST00000376406 7576 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.166e-6■■□□□ 12.8
PABPN1Q86U42 POLG-221ENST00000637238 3022 ntTSL 515.94■□□□□ 0.146e-6■■□□□ 12.8
PABPN1Q86U42 TIMELESS-203ENST00000553532 5121 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.146e-6■■□□□ 12.8
PABPN1Q86U42 KPNB1-211ENST00000582097 2347 ntTSL 215.21■□□□□ 0.026e-6■■□□□ 12.8
PABPN1Q86U42 HSD17B4-227ENST00000522415 900 ntTSL 515.2■□□□□ 0.024e-6■■□□□ 12.8
PABPN1Q86U42 HSD17B4-214ENST00000509951 736 ntTSL 514.75□□□□□ -0.054e-6■■□□□ 12.8
PABPN1Q86U42 HSD17B4-213ENST00000509606 844 ntTSL 214.68□□□□□ -0.064e-6■■□□□ 12.8
PABPN1Q86U42 POLG-222ENST00000637264 3153 ntTSL 514.23□□□□□ -0.136e-6■■□□□ 12.8
PABPN1Q86U42 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC13.98□□□□□ -0.176e-6■■□□□ 12.8
PABPN1Q86U42 KPNB1-209ENST00000580158 603 ntTSL 213.73□□□□□ -0.216e-6■■□□□ 12.8
PABPN1Q86U42 HSD17B4-221ENST00000515235 5540 ntTSL 213.09□□□□□ -0.314e-6■■□□□ 12.8
PABPN1Q86U42 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC12.94□□□□□ -0.344e-6■■□□□ 12.8
PABPN1Q86U42 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC12.67□□□□□ -0.384e-6■■□□□ 12.8
PABPN1Q86U42 CHD1L-206ENST00000469625 423 ntTSL 511.94□□□□□ -0.56e-6■■□□□ 12.8
PABPN1Q86U42 KPNB1-203ENST00000540627 2989 ntTSL 2 BASIC11.05□□□□□ -0.646e-6■■□□□ 12.8
PABPN1Q86U42 ANAPC5-213ENST00000538334 6149 ntTSL 510.86□□□□□ -0.676e-6■■□□□ 12.8
PABPN1Q86U42 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC10.84□□□□□ -0.674e-6■■□□□ 12.8
PABPN1Q86U42 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.786e-6■■□□□ 12.8
PABPN1Q86U42 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.916e-6■■□□□ 12.8
PABPN1Q86U42 PPP1R3E-205ENST00000560073 444 ntTSL 58.72□□□□□ -1.016e-6■■□□□ 12.8
PABPN1Q86U42 GALM-204ENST00000434934 724 ntTSL 37.96□□□□□ -1.146e-6■■□□□ 12.8
PABPN1Q86U42 POLG-216ENST00000636530 100 ntTSL 54.26□□□□□ -1.736e-6■■□□□ 12.8
PABPN1Q86U42 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.175e-7■■□□□ 12.8
PABPN1Q86U42 PFKL-205ENST00000466134 5986 ntTSL 227.72■■■□□ 2.035e-7■■□□□ 12.8
PABPN1Q86U42 PFKL-202ENST00000397961 3390 ntTSL 1 (best)23.5■■□□□ 1.355e-7■■□□□ 12.8
PABPN1Q86U42 LMBR1L-226ENST00000552449 277 ntTSL 315.71■□□□□ 0.113e-10■■□□□ 12.8
PABPN1Q86U42 COL9A3-206ENST00000466532 539 ntTSL 239.8■■■■□ 3.961e-11■■□□□ 12.7
PABPN1Q86U42 TIAL1-211ENST00000489822 2222 ntTSL 228.39■■■□□ 2.144e-8■■□□□ 12.7
PABPN1Q86U42 TIAL1-213ENST00000497671 2321 ntTSL 1 (best)25.43■■□□□ 1.664e-8■■□□□ 12.7
PABPN1Q86U42 TIAL1-207ENST00000463089 907 ntTSL 518.51■□□□□ 0.554e-8■■□□□ 12.7
PABPN1Q86U42 TIAL1-205ENST00000436547 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.054e-8■■□□□ 12.7
PABPN1Q86U42 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC12.65□□□□□ -0.384e-8■■□□□ 12.7
PABPN1Q86U42 TIAL1-209ENST00000470781 1727 ntTSL 210.55□□□□□ -0.724e-8■■□□□ 12.7
PABPN1Q86U42 AMPD2-215ENST00000526301 2354 ntTSL 1 (best)25.48■■□□□ 1.672e-6■■□□□ 12.7
PABPN1Q86U42 SUPT5H-218ENST00000600818 718 ntTSL 226.93■■□□□ 1.92e-10■■□□□ 12.7
PABPN1Q86U42 PLCG1-204ENST00000461641 936 ntTSL 527.02■■□□□ 1.925e-9■■□□□ 12.7
PABPN1Q86U42 INTS11-241ENST00000531292 704 ntTSL 222.37■■□□□ 1.174e-7■■□□□ 12.7
PABPN1Q86U42 NT5C3B-216ENST00000523903 1534 ntTSL 1 (best)43.34■■■■■ 4.537e-9■■□□□ 12.7
PABPN1Q86U42 NT5C3B-201ENST00000393910 1253 ntTSL 242.87■■■■■ 4.457e-9■■□□□ 12.7
PABPN1Q86U42 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC41.18■■■■■ 4.187e-9■■□□□ 12.7
PABPN1Q86U42 NT5C3B-207ENST00000470690 1729 ntTSL 540.53■■■■■ 4.087e-9■■□□□ 12.7
PABPN1Q86U42 NT5C3B-206ENST00000469698 1573 ntTSL 337.72■■■■□ 3.637e-9■■□□□ 12.7
PABPN1Q86U42 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC36.02■■■■□ 3.367e-9■■□□□ 12.7
PABPN1Q86U42 NT5C3B-213ENST00000517701 1028 ntTSL 224.73■■□□□ 1.557e-9■■□□□ 12.7
PABPN1Q86U42 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.991e-6■■□□□ 12.7
PABPN1Q86U42 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC29.08■■■□□ 2.253e-8■■□□□ 12.7
PABPN1Q86U42 MYBBP1A-211ENST00000574547 1607 ntTSL 1 (best)33.6■■■□□ 2.973e-7■■□□□ 12.7
PABPN1Q86U42 GOLGA8A-202ENST00000432566 4577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.111e-6■■□□□ 12.7
PABPN1Q86U42 GOLGA8A-203ENST00000473125 6233 ntTSL 1 (best)15.26■□□□□ 0.031e-6■■□□□ 12.7
PABPN1Q86U42 UCKL1-207ENST00000632800 1530 ntTSL 527.24■■□□□ 1.954e-7■■□□□ 12.7
PABPN1Q86U42 DNAJC11-204ENST00000451196 1357 ntTSL 1 (best)38.07■■■■□ 3.698e-7■■□□□ 12.7
PABPN1Q86U42 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.068e-7■■□□□ 12.7
PABPN1Q86U42 DNAJC11-206ENST00000465508 3014 ntTSL 219.55■□□□□ 0.728e-7■■□□□ 12.7
PABPN1Q86U42 CARD10-208ENST00000486118 546 ntTSL 438.25■■■■□ 3.711e-11■■□□□ 12.7
PABPN1Q86U42 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC21.93■■□□□ 1.19e-7■■□□□ 12.7
PABPN1Q86U42 DNAJC10-206ENST00000491074 3962 ntTSL 1 (best)15.97■□□□□ 0.159e-7■■□□□ 12.7
PABPN1Q86U42 DNAJC10-202ENST00000418559 2988 ntTSL 1 (best)7.63□□□□□ -1.199e-7■■□□□ 12.7
PABPN1Q86U42 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.59e-7■■□□□ 12.7
PABPN1Q86U42 PCYT2-212ENST00000572995 804 ntTSL 330.56■■■□□ 2.481e-7■■□□□ 12.7
PABPN1Q86U42 COL7A1-202ENST00000422991 597 ntTSL 532.5■■■□□ 2.793e-6■■□□□ 12.7
PABPN1Q86U42 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.928e-7■■□□□ 12.7
PABPN1Q86U42 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.838e-7■■□□□ 12.7
PABPN1Q86U42 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC18.72■□□□□ 0.598e-7■■□□□ 12.7
PABPN1Q86U42 GET4-204ENST00000426056 502 ntTSL 419.1■□□□□ 0.654e-7■■□□□ 12.7
PABPN1Q86U42 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.081e-10■■□□□ 12.7
PABPN1Q86U42 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.021e-10■■□□□ 12.7
PABPN1Q86U42 SLC38A3-206ENST00000614032 2978 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.743e-8■■□□□ 12.7
PABPN1Q86U42 NADSYN1-210ENST00000527852 582 ntTSL 522.74■■□□□ 1.232e-6■■□□□ 12.7
PABPN1Q86U42 DLST-207ENST00000555089 1078 ntTSL 1 (best)18.26■□□□□ 0.515e-6■■□□□ 12.7
PABPN1Q86U42 MVD-211ENST00000565720 436 ntTSL 338.1■■■■□ 3.692e-8■■□□□ 12.6
PABPN1Q86U42 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC40.42■■■■■ 4.067e-8■■□□□ 12.6
PABPN1Q86U42 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC40.23■■■■■ 4.037e-8■■□□□ 12.6
PABPN1Q86U42 HSF1-202ENST00000527328 2336 ntTSL 225.75■■□□□ 1.717e-8■■□□□ 12.6
PABPN1Q86U42 HSF1-210ENST00000532338 3451 ntTSL 220.43■□□□□ 0.867e-8■■□□□ 12.6
PABPN1Q86U42 HSF1-208ENST00000530661 552 ntTSL 318.29■□□□□ 0.527e-8■■□□□ 12.6
PABPN1Q86U42 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC37.45■■■■□ 3.593e-7■■□□□ 12.6
PABPN1Q86U42 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.683e-7■■□□□ 12.6
PABPN1Q86U42 YBX3-217ENST00000546164 805 ntTSL 223.65■■□□□ 1.383e-7■■□□□ 12.6
PABPN1Q86U42 YBX3-208ENST00000540447 6393 ntTSL 210.21□□□□□ -0.773e-7■■□□□ 12.6
PABPN1Q86U42 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.74e-8■■□□□ 12.6
PABPN1Q86U42 PABPC1L-209ENST00000465761 801 ntTSL 220.16■□□□□ 0.821e-9■■□□□ 12.6
PABPN1Q86U42 HSPG2-210ENST00000481644 839 ntTSL 237.5■■■■□ 3.595e-7■■□□□ 12.6
PABPN1Q86U42 QARS-225ENST00000634336 486 ntTSL 522.57■■□□□ 1.28e-7■■□□□ 12.6
PABPN1Q86U42 QARS-223ENST00000494984 679 ntTSL 218.44■□□□□ 0.548e-7■■□□□ 12.6
PABPN1Q86U42 THOC5-214ENST00000484924 909 ntTSL 515.02■□□□□ -09e-7■■□□□ 12.6
PABPN1Q86U42 NDUFV1-221ENST00000532244 786 ntTSL 235.83■■■■□ 3.331e-8■■□□□ 12.6
PABPN1Q86U42 AC008763.2-201ENST00000598664 537 ntAPPRIS P5 TSL 532.1■■■□□ 2.731e-8■■□□□ 12.6
PABPN1Q86U42 QARS-214ENST00000478561 670 ntTSL 329.15■■■□□ 2.261e-8■■□□□ 12.6
PABPN1Q86U42 QARS-212ENST00000470225 691 ntTSL 528.39■■■□□ 2.141e-8■■□□□ 12.6
PABPN1Q86U42 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC27.2■■□□□ 1.951e-8■■□□□ 12.6
PABPN1Q86U42 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.731e-8■■□□□ 12.6
PABPN1Q86U42 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.731e-8■■□□□ 12.6
PABPN1Q86U42 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.521e-8■■□□□ 12.6
Retrieved 100 of 8,254 protein–RNA pairs in 80.2 ms