RNA–Protein interactions for RNA: ENST00000469625.2

CHD1L-206, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 423 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-206ENST00000469625 AEBP2Q6ZN18 517 aaPredicted RBP15.87■□□□□ 0.13
CHD1L-206ENST00000469625 CHIC1Q5VXU3 224 aa15.57■□□□□ 0.08
CHD1L-206ENST00000469625 NISCHQ9Y2I1 1504 aa14.62□□□□□ -0.07
CHD1L-206ENST00000469625 PHF23Q9BUL5 403 aaPredicted RBP13.61□□□□□ -0.23
CHD1L-206ENST00000469625 SENP3Q9H4L4 574 aaPredicted RBP13.61□□□□□ -0.23
CHD1L-206ENST00000469625 CCDC180Q9P1Z9 1646 aa13.05□□□□□ -0.32
CHD1L-206ENST00000469625 ABCC9O60706 1549 aa12.81□□□□□ -0.36
CHD1L-206ENST00000469625 PLPPR3Q6T4P5 718 aa12.72□□□□□ -0.37
CHD1L-206ENST00000469625 FOXD1Q16676 465 aa12.54□□□□□ -0.4
CHD1L-206ENST00000469625 RB1CC1Q8TDY2 1594 aa12.31□□□□□ -0.44
CHD1L-206ENST00000469625 NACADO15069 1562 aa12.28□□□□□ -0.44
CHD1L-206ENST00000469625 DCAF8L2P0C7V8 631 aa12.22□□□□□ -0.45
CHD1L-206ENST00000469625 MYO15BQ96JP2 1530 aa12.18□□□□□ -0.46
CHD1L-206ENST00000469625 ZCCHC6Q5VYS8 1495 aaKnown RBP12.18□□□□□ -0.46
CHD1L-206ENST00000469625 DCAF1Q9Y4B6 1507 aa12.11□□□□□ -0.47
CHD1L-206ENST00000469625 ADRA2BP18089 450 aa12.06□□□□□ -0.48
CHD1L-206ENST00000469625 PPP6R1Q9UPN7 881 aa12.01□□□□□ -0.49
CHD1L-206ENST00000469625 UNC13AQ9UPW8 1703 aa11.98□□□□□ -0.49
CHD1L-206ENST00000469625 PABPN1Q86U42 306 aaKnown RBP eCLIP11.94□□□□□ -0.56e-6■■□□□ 12.8
CHD1L-206ENST00000469625 PIAS4Q8N2W9 510 aaPredicted RBP11.92□□□□□ -0.5
CHD1L-206ENST00000469625 BICRAQ9NZM4 1560 aa11.91□□□□□ -0.5
CHD1L-206ENST00000469625 SCRIBQ14160 1630 aa11.9□□□□□ -0.5
CHD1L-206ENST00000469625 SHROOM4Q9ULL8 1493 aa11.84□□□□□ -0.51
CHD1L-206ENST00000469625 DNAJC5BQ9UF47 199 aa11.75□□□□□ -0.53
CHD1L-206ENST00000469625 MSH5O43196 834 aa11.67□□□□□ -0.54
CHD1L-206ENST00000469625 EIF4G1Q04637 1599 aaKnown RBP11.62□□□□□ -0.55
CHD1L-206ENST00000469625 CC2D2AQ9P2K1 1620 aa11.58□□□□□ -0.56
CHD1L-206ENST00000469625 CECR2Q9BXF3 1484 aa11.52□□□□□ -0.56
CHD1L-206ENST00000469625 POTEDQ86YR6 584 aa11.49□□□□□ -0.57
CHD1L-206ENST00000469625 EHMT2Q96KQ7 1210 aa11.46□□□□□ -0.57
CHD1L-206ENST00000469625 SMARCA4P51532 1647 aa11.37□□□□□ -0.59
CHD1L-206ENST00000469625 BAZ1AQ9NRL2 1556 aaPredicted RBP11.36□□□□□ -0.59
CHD1L-206ENST00000469625 SMARCA2P51531 1590 aa11.32□□□□□ -0.6
CHD1L-206ENST00000469625 NCAPD3P42695 1498 aa11.32□□□□□ -0.6
CHD1L-206ENST00000469625 ATAD2BQ9ULI0 1458 aa11.32□□□□□ -0.6
CHD1L-206ENST00000469625 HMGXB3Q12766 1538 aa11.28□□□□□ -0.6
CHD1L-206ENST00000469625 KCNA4P22459 653 aa11.27□□□□□ -0.61
CHD1L-206ENST00000469625 MROH2BQ7Z745 1585 aa11.26□□□□□ -0.61
CHD1L-206ENST00000469625 PEG3Q9GZU2 1588 aa11.26□□□□□ -0.61
CHD1L-206ENST00000469625 BAZ1BQ9UIG0 1483 aaKnown RBP11.25□□□□□ -0.61
CHD1L-206ENST00000469625 SCAF1Q9H7N4 1312 aaKnown RBP11.17□□□□□ -0.62
CHD1L-206ENST00000469625 PPP4R3CPQ6ZMV5 832 aa11.16□□□□□ -0.62
CHD1L-206ENST00000469625 WIZO95785 1651 aa11.13□□□□□ -0.63
CHD1L-206ENST00000469625 RSF1Q96T23 1441 aaPredicted RBP11.11□□□□□ -0.63
CHD1L-206ENST00000469625 ERCC6Q03468 1493 aa11.07□□□□□ -0.64
CHD1L-206ENST00000469625 NESP48681 1621 aa11.06□□□□□ -0.64
CHD1L-206ENST00000469625 TOP2AP11388 1531 aaKnown RBP11.04□□□□□ -0.64
CHD1L-206ENST00000469625 LAMC3Q9Y6N6 1575 aa11.04□□□□□ -0.64
CHD1L-206ENST00000469625 CSRNP3Q8WYN3 585 aa10.99□□□□□ -0.65
CHD1L-206ENST00000469625 CADPSQ9ULU8 1353 aa10.98□□□□□ -0.65
CHD1L-206ENST00000469625 CUX2O14529 1486 aa10.98□□□□□ -0.65
CHD1L-206ENST00000469625 NCBP3Q53F19 620 aaKnown RBP10.97□□□□□ -0.65
CHD1L-206ENST00000469625 PDS5BQ9NTI5 1447 aa10.97□□□□□ -0.65
CHD1L-206ENST00000469625 KIF21AQ7Z4S6 1674 aa10.92□□□□□ -0.66
CHD1L-206ENST00000469625 THOC2Q8NI27 1593 aaKnown RBP10.92□□□□□ -0.66
CHD1L-206ENST00000469625 MAPK8IP2Q13387 824 aaPredicted RBP10.91□□□□□ -0.66
CHD1L-206ENST00000469625 CFTRP13569 1480 aa10.91□□□□□ -0.66
CHD1L-206ENST00000469625 CCDC88BA6NC98 1476 aa10.88□□□□□ -0.67
CHD1L-206ENST00000469625 CEP164Q9UPV0 1460 aa10.88□□□□□ -0.67
CHD1L-206ENST00000469625 SLC4A1APQ9BWU0 796 aaKnown RBP10.88□□□□□ -0.67
CHD1L-206ENST00000469625 FANCD2Q9BXW9 1451 aa10.87□□□□□ -0.67
CHD1L-206ENST00000469625 MRC2Q9UBG0 1479 aa10.87□□□□□ -0.67
CHD1L-206ENST00000469625 CNKSR2Q8WXI2 1034 aa10.87□□□□□ -0.67
CHD1L-206ENST00000469625 WDR62O43379 1518 aa10.84□□□□□ -0.67
CHD1L-206ENST00000469625 PRDM2Q13029 1718 aa10.82□□□□□ -0.68
CHD1L-206ENST00000469625 DMRT2Q9Y5R5 561 aa10.81□□□□□ -0.68
CHD1L-206ENST00000469625 SUPT5HO00267 1087 aaKnown RBP10.77□□□□□ -0.69
CHD1L-206ENST00000469625 URB2Q14146 1524 aaKnown RBP10.76□□□□□ -0.69
CHD1L-206ENST00000469625 SLC24A1O60721 1099 aa10.73□□□□□ -0.69
CHD1L-206ENST00000469625 ABCC8Q09428 1581 aa10.69□□□□□ -0.7
CHD1L-206ENST00000469625 NPM3O75607 178 aaKnown RBP10.69□□□□□ -0.7
CHD1L-206ENST00000469625 TOPBP1Q92547 1522 aa10.68□□□□□ -0.7
CHD1L-206ENST00000469625 DNMBPQ6XZF7 1577 aa10.68□□□□□ -0.7
CHD1L-206ENST00000469625 DNAJC5Q9H3Z4 198 aa10.66□□□□□ -0.7
CHD1L-206ENST00000469625 RNF216Q9NWF9 866 aaPredicted RBP10.65□□□□□ -0.7
CHD1L-206ENST00000469625 IFT140Q96RY7 1462 aa10.65□□□□□ -0.7
CHD1L-206ENST00000469625 POLA1P09884 1462 aaPredicted RBP10.58□□□□□ -0.72
CHD1L-206ENST00000469625 CUX1P39880 1505 aa10.58□□□□□ -0.72
CHD1L-206ENST00000469625 ZNF608Q9ULD9 1512 aaPredicted RBP10.58□□□□□ -0.72
CHD1L-206ENST00000469625 EIF4G3O43432 1585 aaKnown RBP10.56□□□□□ -0.72
CHD1L-206ENST00000469625 FGD5Q6ZNL6 1462 aa10.56□□□□□ -0.72
CHD1L-206ENST00000469625 TARBP1Q13395 1621 aaKnown RBP10.56□□□□□ -0.72
CHD1L-206ENST00000469625 HOXD11P31277 338 aaPredicted RBP10.56□□□□□ -0.72
CHD1L-206ENST00000469625 SOGA1O94964 1423 aa10.54□□□□□ -0.72
CHD1L-206ENST00000469625 RAD54L2Q9Y4B4 1467 aa10.53□□□□□ -0.72
CHD1L-206ENST00000469625 WDR97A6NE52 1622 aa10.51□□□□□ -0.73
CHD1L-206ENST00000469625 WRNQ14191 1432 aaPredicted RBP eCLIP10.5□□□□□ -0.73
CHD1L-206ENST00000469625 AQRO60306 1485 aaKnown RBP eCLIP10.5□□□□□ -0.73
CHD1L-206ENST00000469625 DCAF8L1A6NGE4 600 aa10.48□□□□□ -0.73
CHD1L-206ENST00000469625 TDRD9Q8NDG6 1382 aaKnown RBP10.48□□□□□ -0.73
CHD1L-206ENST00000469625 TOP2BQ02880 1626 aa10.47□□□□□ -0.73
CHD1L-206ENST00000469625 BIVM-ERCC5R4GMW8 1640 aa10.47□□□□□ -0.73
CHD1L-206ENST00000469625 OSCARQ8IYS5 282 aa10.47□□□□□ -0.73
CHD1L-206ENST00000469625 SYNJ1O43426 1573 aa10.47□□□□□ -0.73
CHD1L-206ENST00000469625 ABCA10Q8WWZ4 1543 aa10.45□□□□□ -0.74
CHD1L-206ENST00000469625 GRIN2BQ13224 1484 aa10.44□□□□□ -0.74
CHD1L-206ENST00000469625 AMER1Q5JTC6 1135 aaPredicted RBP10.44□□□□□ -0.74
CHD1L-206ENST00000469625 SNAPC4Q5SXM2 1469 aa10.43□□□□□ -0.74
CHD1L-206ENST00000469625 GAPVD1Q14C86 1478 aa10.42□□□□□ -0.74
CHD1L-206ENST00000469625 MAGI1Q96QZ7 1491 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms