Protein–RNA interactions for Protein: Q5TDP6

LGSN, Lengsin, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGSNQ5TDP6 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LGSNQ5TDP6 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.02■□□□□ 0.96
LGSNQ5TDP6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
LGSNQ5TDP6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LGSNQ5TDP6 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.02■□□□□ 0.96
LGSNQ5TDP6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
LGSNQ5TDP6 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LGSNQ5TDP6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
LGSNQ5TDP6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.02■□□□□ 0.96
LGSNQ5TDP6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.02■□□□□ 0.96
LGSNQ5TDP6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.02■□□□□ 0.96
LGSNQ5TDP6 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
LGSNQ5TDP6 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LGSNQ5TDP6 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LGSNQ5TDP6 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LGSNQ5TDP6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LGSNQ5TDP6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
LGSNQ5TDP6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 PLK5-205ENST00000642079 1969 ntBASIC21.01■□□□□ 0.95
LGSNQ5TDP6 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.01■□□□□ 0.95
LGSNQ5TDP6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
LGSNQ5TDP6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
LGSNQ5TDP6 AP005212.1-201ENST00000581547 1997 ntBASIC21■□□□□ 0.95
LGSNQ5TDP6 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC21■□□□□ 0.95
LGSNQ5TDP6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21■□□□□ 0.95
LGSNQ5TDP6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
LGSNQ5TDP6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21■□□□□ 0.95
LGSNQ5TDP6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21■□□□□ 0.95
LGSNQ5TDP6 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
LGSNQ5TDP6 AC121338.2-201ENST00000622535 1744 ntBASIC21■□□□□ 0.95
LGSNQ5TDP6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LGSNQ5TDP6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LGSNQ5TDP6 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LGSNQ5TDP6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LGSNQ5TDP6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LGSNQ5TDP6 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LGSNQ5TDP6 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LGSNQ5TDP6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGSNQ5TDP6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.99■□□□□ 0.95
LGSNQ5TDP6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.99■□□□□ 0.95
LGSNQ5TDP6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGSNQ5TDP6 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGSNQ5TDP6 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LGSNQ5TDP6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.99■□□□□ 0.95
LGSNQ5TDP6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.99■□□□□ 0.95
LGSNQ5TDP6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGSNQ5TDP6 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGSNQ5TDP6 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGSNQ5TDP6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LGSNQ5TDP6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.98■□□□□ 0.95
LGSNQ5TDP6 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.98■□□□□ 0.95
LGSNQ5TDP6 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.98■□□□□ 0.95
LGSNQ5TDP6 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.98■□□□□ 0.95
LGSNQ5TDP6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LGSNQ5TDP6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LGSNQ5TDP6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LGSNQ5TDP6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LGSNQ5TDP6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
LGSNQ5TDP6 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LGSNQ5TDP6 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 SMUG1P1-201ENST00000590640 811 ntBASIC20.97■□□□□ 0.95
LGSNQ5TDP6 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
LGSNQ5TDP6 AC092667.1-201ENST00000434301 2586 ntBASIC20.97■□□□□ 0.95
LGSNQ5TDP6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms