Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 MOB2-207ENST00000614710 705 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC01554Q52M75 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
LINC01554Q52M75 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
LINC01554Q52M75 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC01554Q52M75 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC10.48□□□□□ -0.73
LINC01554Q52M75 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LINC01554Q52M75 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LINC01554Q52M75 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
LINC01554Q52M75 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01554Q52M75 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
LINC01554Q52M75 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC01554Q52M75 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01554Q52M75 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC01554Q52M75 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
LINC01554Q52M75 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC01554Q52M75 HLA-L-211ENST00000482052 1765 ntBASIC10.47□□□□□ -0.73
LINC01554Q52M75 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC01554Q52M75 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01554Q52M75 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01554Q52M75 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01554Q52M75 AC018445.3-201ENST00000624177 1945 ntBASIC10.47□□□□□ -0.73
LINC01554Q52M75 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01554Q52M75 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01554Q52M75 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
LINC01554Q52M75 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01554Q52M75 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
LINC01554Q52M75 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01554Q52M75 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC01554Q52M75 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
LINC01554Q52M75 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC01554Q52M75 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC10.47□□□□□ -0.73
LINC01554Q52M75 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01554Q52M75 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01554Q52M75 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC10.47□□□□□ -0.73
LINC01554Q52M75 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01554Q52M75 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01554Q52M75 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01554Q52M75 SHD-204ENST00000599689 1729 ntTSL 5 BASIC10.47□□□□□ -0.73
LINC01554Q52M75 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01554Q52M75 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
LINC01554Q52M75 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
LINC01554Q52M75 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC01554Q52M75 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01554Q52M75 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01554Q52M75 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC01554Q52M75 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01554Q52M75 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
LINC01554Q52M75 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC01554Q52M75 LTF-203ENST00000426532 2494 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC01554Q52M75 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC01554Q52M75 TNRC18P3-201ENST00000441896 2691 ntBASIC10.46□□□□□ -0.73
LINC01554Q52M75 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01554Q52M75 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
LINC01554Q52M75 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.73
LINC01554Q52M75 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC10.46□□□□□ -0.73
LINC01554Q52M75 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC10.46□□□□□ -0.73
LINC01554Q52M75 CEP120-209ENST00000515110 606 ntTSL 3 BASIC10.46□□□□□ -0.73
LINC01554Q52M75 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
LINC01554Q52M75 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
LINC01554Q52M75 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
LINC01554Q52M75 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01554Q52M75 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01554Q52M75 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01554Q52M75 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC10.46□□□□□ -0.74
LINC01554Q52M75 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01554Q52M75 OVCH1-AS1-204ENST00000641955 5529 ntBASIC10.46□□□□□ -0.74
LINC01554Q52M75 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01554Q52M75 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
LINC01554Q52M75 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
LINC01554Q52M75 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01554Q52M75 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01554Q52M75 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC10.46□□□□□ -0.74
LINC01554Q52M75 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01554Q52M75 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
LINC01554Q52M75 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 AC068418.2-201ENST00000577309 3703 ntBASIC10.45□□□□□ -0.74
LINC01554Q52M75 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms