Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.79■□□□□ 0.76
WNT3P56703 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.79■□□□□ 0.76
WNT3P56703 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
WNT3P56703 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3P56703 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
WNT3P56703 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3P56703 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3P56703 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.79■□□□□ 0.76
WNT3P56703 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.79■□□□□ 0.76
WNT3P56703 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.79■□□□□ 0.76
WNT3P56703 AL162430.1-201ENST00000480705 870 ntBASIC19.79■□□□□ 0.76
WNT3P56703 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.79■□□□□ 0.76
WNT3P56703 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.79■□□□□ 0.76
WNT3P56703 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3P56703 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
WNT3P56703 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3P56703 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3P56703 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3P56703 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
WNT3P56703 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
WNT3P56703 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.79■□□□□ 0.76
WNT3P56703 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.78■□□□□ 0.76
WNT3P56703 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
WNT3P56703 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
WNT3P56703 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
WNT3P56703 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.78■□□□□ 0.76
WNT3P56703 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.78■□□□□ 0.76
WNT3P56703 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
WNT3P56703 AC012414.1-201ENST00000556676 535 ntBASIC19.78■□□□□ 0.76
WNT3P56703 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
WNT3P56703 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
WNT3P56703 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
WNT3P56703 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
WNT3P56703 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3P56703 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3P56703 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
WNT3P56703 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3P56703 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3P56703 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
WNT3P56703 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.77■□□□□ 0.76
WNT3P56703 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
WNT3P56703 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.77■□□□□ 0.76
WNT3P56703 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.77■□□□□ 0.76
WNT3P56703 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.77■□□□□ 0.76
WNT3P56703 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.77■□□□□ 0.76
WNT3P56703 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.77■□□□□ 0.76
WNT3P56703 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
WNT3P56703 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
WNT3P56703 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
WNT3P56703 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.77■□□□□ 0.75
WNT3P56703 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.77■□□□□ 0.75
WNT3P56703 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.76■□□□□ 0.75
WNT3P56703 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3P56703 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3P56703 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3P56703 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3P56703 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3P56703 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3P56703 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3P56703 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3P56703 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.76■□□□□ 0.75
WNT3P56703 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.76■□□□□ 0.75
WNT3P56703 EEF1DP3-203ENST00000566025 782 ntBASIC19.76■□□□□ 0.75
WNT3P56703 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.76■□□□□ 0.75
WNT3P56703 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.76■□□□□ 0.75
WNT3P56703 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3P56703 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3P56703 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
WNT3P56703 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3P56703 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
WNT3P56703 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3P56703 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.75■□□□□ 0.75
WNT3P56703 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
WNT3P56703 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
WNT3P56703 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3P56703 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3P56703 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3P56703 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3P56703 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3P56703 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3P56703 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.75■□□□□ 0.75
WNT3P56703 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3P56703 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3P56703 TPRG1LP1-201ENST00000598702 760 ntBASIC19.75■□□□□ 0.75
WNT3P56703 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3P56703 AC121338.2-201ENST00000622535 1744 ntBASIC19.75■□□□□ 0.75
WNT3P56703 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3P56703 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3P56703 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
WNT3P56703 AC092667.1-201ENST00000434301 2586 ntBASIC19.75■□□□□ 0.75
WNT3P56703 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.75■□□□□ 0.75
WNT3P56703 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
WNT3P56703 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
WNT3P56703 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
WNT3P56703 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
WNT3P56703 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.74■□□□□ 0.75
WNT3P56703 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
WNT3P56703 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.74■□□□□ 0.75
WNT3P56703 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
WNT3P56703 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms