Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CLCN3P51790 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CLCN3P51790 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CLCN3P51790 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CLCN3P51790 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.06■■□□□ 1.28
CLCN3P51790 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CLCN3P51790 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
CLCN3P51790 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.06■■□□□ 1.28
CLCN3P51790 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.06■■□□□ 1.28
CLCN3P51790 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
CLCN3P51790 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CLCN3P51790 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLCN3P51790 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLCN3P51790 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLCN3P51790 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CLCN3P51790 BX276092.2-201ENST00000417668 665 ntBASIC23.05■■□□□ 1.28
CLCN3P51790 AC073210.2-201ENST00000430369 194 ntBASIC23.05■■□□□ 1.28
CLCN3P51790 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CLCN3P51790 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.05■■□□□ 1.28
CLCN3P51790 MIR4758-201ENST00000577688 71 ntBASIC23.05■■□□□ 1.28
CLCN3P51790 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.05■■□□□ 1.28
CLCN3P51790 AC010980.2-201ENST00000587099 1412 ntBASIC23.05■■□□□ 1.28
CLCN3P51790 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CLCN3P51790 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.05■■□□□ 1.28
CLCN3P51790 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.05■■□□□ 1.28
CLCN3P51790 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN3P51790 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN3P51790 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN3P51790 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN3P51790 ABHD17AP1-201ENST00000358206 933 ntBASIC23.04■■□□□ 1.28
CLCN3P51790 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.04■■□□□ 1.28
CLCN3P51790 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.04■■□□□ 1.28
CLCN3P51790 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN3P51790 PBX1-209ENST00000485769 834 ntTSL 2 BASIC23.04■■□□□ 1.28
CLCN3P51790 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.04■■□□□ 1.28
CLCN3P51790 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN3P51790 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CLCN3P51790 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
CLCN3P51790 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN3P51790 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CLCN3P51790 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CLCN3P51790 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
CLCN3P51790 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
CLCN3P51790 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN3P51790 GOLGA2P6-201ENST00000340929 2049 ntBASIC23.03■■□□□ 1.28
CLCN3P51790 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CLCN3P51790 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN3P51790 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.03■■□□□ 1.28
CLCN3P51790 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC23.03■■□□□ 1.28
CLCN3P51790 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN3P51790 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
CLCN3P51790 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.03■■□□□ 1.28
CLCN3P51790 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN3P51790 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.03■■□□□ 1.28
CLCN3P51790 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN3P51790 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN3P51790 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CLCN3P51790 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CLCN3P51790 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CLCN3P51790 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLCN3P51790 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CLCN3P51790 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLCN3P51790 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CLCN3P51790 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLCN3P51790 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CLCN3P51790 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLCN3P51790 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CLCN3P51790 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC23.02■■□□□ 1.28
CLCN3P51790 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC23.02■■□□□ 1.28
CLCN3P51790 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.01■■□□□ 1.27
CLCN3P51790 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLCN3P51790 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.01■■□□□ 1.27
CLCN3P51790 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CLCN3P51790 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CLCN3P51790 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.01■■□□□ 1.27
CLCN3P51790 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.01■■□□□ 1.27
CLCN3P51790 AC092118.2-201ENST00000613495 667 ntBASIC23.01■■□□□ 1.27
CLCN3P51790 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CLCN3P51790 MFF-203ENST00000349901 1716 ntTSL 2 BASIC23.01■■□□□ 1.27
CLCN3P51790 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLCN3P51790 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.01■■□□□ 1.27
CLCN3P51790 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLCN3P51790 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
CLCN3P51790 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.01■■□□□ 1.27
CLCN3P51790 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CLCN3P51790 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
CLCN3P51790 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLCN3P51790 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
CLCN3P51790 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLCN3P51790 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CLCN3P51790 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23■■□□□ 1.27
CLCN3P51790 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23■■□□□ 1.27
CLCN3P51790 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23■■□□□ 1.27
CLCN3P51790 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23■■□□□ 1.27
CLCN3P51790 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC23■■□□□ 1.27
CLCN3P51790 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC23■■□□□ 1.27
CLCN3P51790 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC23■■□□□ 1.27
CLCN3P51790 AL117328.2-201ENST00000624617 1940 ntBASIC23■■□□□ 1.27
CLCN3P51790 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CLCN3P51790 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms