Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CD74P04233 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD74P04233 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD74P04233 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD74P04233 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.58■□□□□ 0.4
CD74P04233 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.58■□□□□ 0.4
CD74P04233 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC17.58■□□□□ 0.4
CD74P04233 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.58■□□□□ 0.4
CD74P04233 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CD74P04233 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CD74P04233 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.58■□□□□ 0.4
CD74P04233 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
CD74P04233 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD74P04233 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD74P04233 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CD74P04233 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CD74P04233 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD74P04233 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD74P04233 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD74P04233 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CD74P04233 AC010997.5-201ENST00000609182 354 ntBASIC17.57■□□□□ 0.4
CD74P04233 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD74P04233 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CD74P04233 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.57■□□□□ 0.4
CD74P04233 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD74P04233 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.57■□□□□ 0.4
CD74P04233 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD74P04233 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD74P04233 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD74P04233 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
CD74P04233 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CD74P04233 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD74P04233 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD74P04233 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.56■□□□□ 0.4
CD74P04233 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD74P04233 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD74P04233 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD74P04233 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC17.56■□□□□ 0.4
CD74P04233 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CD74P04233 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CD74P04233 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.56■□□□□ 0.4
CD74P04233 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD74P04233 AC099778.1-201ENST00000568593 1911 ntBASIC17.56■□□□□ 0.4
CD74P04233 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD74P04233 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD74P04233 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD74P04233 SMG8-203ENST00000578922 2178 ntBASIC17.56■□□□□ 0.4
CD74P04233 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC17.56■□□□□ 0.4
CD74P04233 AC112907.3-201ENST00000577781 2400 ntBASIC17.56■□□□□ 0.4
CD74P04233 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD74P04233 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD74P04233 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CD74P04233 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CD74P04233 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD74P04233 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD74P04233 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CD74P04233 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CD74P04233 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.55■□□□□ 0.4
CD74P04233 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD74P04233 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD74P04233 LSM4-201ENST00000252816 986 ntTSL 2 BASIC17.55■□□□□ 0.4
CD74P04233 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CD74P04233 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD74P04233 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.55■□□□□ 0.4
CD74P04233 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CD74P04233 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD74P04233 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD74P04233 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD74P04233 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD74P04233 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CD74P04233 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD74P04233 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC17.55■□□□□ 0.4
CD74P04233 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CD74P04233 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CD74P04233 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD74P04233 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.54■□□□□ 0.4
CD74P04233 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.54■□□□□ 0.4
CD74P04233 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.54■□□□□ 0.4
CD74P04233 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CD74P04233 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CD74P04233 KRT125P-201ENST00000546827 989 ntBASIC17.54■□□□□ 0.4
CD74P04233 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD74P04233 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD74P04233 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CD74P04233 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CD74P04233 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD74P04233 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.54■□□□□ 0.4
CD74P04233 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD74P04233 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.53■□□□□ 0.4
CD74P04233 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD74P04233 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD74P04233 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD74P04233 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.53■□□□□ 0.4
CD74P04233 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD74P04233 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.53■□□□□ 0.4
CD74P04233 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD74P04233 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD74P04233 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CD74P04233 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD74P04233 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms