Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TGFAP01135 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TGFAP01135 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.22■□□□□ 0.35
TGFAP01135 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC17.21■□□□□ 0.35
TGFAP01135 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TGFAP01135 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TGFAP01135 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TGFAP01135 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TGFAP01135 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TGFAP01135 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
TGFAP01135 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TGFAP01135 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TGFAP01135 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TGFAP01135 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TGFAP01135 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.21■□□□□ 0.35
TGFAP01135 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
TGFAP01135 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.21■□□□□ 0.35
TGFAP01135 AL355472.2-201ENST00000422958 438 ntBASIC17.21■□□□□ 0.35
TGFAP01135 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.21■□□□□ 0.35
TGFAP01135 AC245052.3-201ENST00000450182 901 ntBASIC17.21■□□□□ 0.35
TGFAP01135 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TGFAP01135 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.21■□□□□ 0.35
TGFAP01135 UNC93B5-201ENST00000530315 699 ntBASIC17.21■□□□□ 0.35
TGFAP01135 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TGFAP01135 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TGFAP01135 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
TGFAP01135 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TGFAP01135 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.21■□□□□ 0.34
TGFAP01135 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TGFAP01135 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TGFAP01135 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
TGFAP01135 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.2■□□□□ 0.34
TGFAP01135 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TGFAP01135 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.2■□□□□ 0.34
TGFAP01135 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.2■□□□□ 0.34
TGFAP01135 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TGFAP01135 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TGFAP01135 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TGFAP01135 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.2■□□□□ 0.34
TGFAP01135 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TGFAP01135 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
TGFAP01135 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.2■□□□□ 0.34
TGFAP01135 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.2■□□□□ 0.34
TGFAP01135 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.2■□□□□ 0.34
TGFAP01135 AP003097.1-201ENST00000530657 1135 ntBASIC17.2■□□□□ 0.34
TGFAP01135 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.2■□□□□ 0.34
TGFAP01135 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.2■□□□□ 0.34
TGFAP01135 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.2■□□□□ 0.34
TGFAP01135 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.2■□□□□ 0.34
TGFAP01135 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.2■□□□□ 0.34
TGFAP01135 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TGFAP01135 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TGFAP01135 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TGFAP01135 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TGFAP01135 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TGFAP01135 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TGFAP01135 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.2■□□□□ 0.34
TGFAP01135 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TGFAP01135 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TGFAP01135 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC17.19■□□□□ 0.34
TGFAP01135 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TGFAP01135 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.19■□□□□ 0.34
TGFAP01135 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.19■□□□□ 0.34
TGFAP01135 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TGFAP01135 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TGFAP01135 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.19■□□□□ 0.34
TGFAP01135 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TGFAP01135 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TGFAP01135 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TGFAP01135 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TGFAP01135 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.19■□□□□ 0.34
TGFAP01135 RPS2P4-201ENST00000476944 856 ntBASIC17.19■□□□□ 0.34
TGFAP01135 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.19■□□□□ 0.34
TGFAP01135 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.19■□□□□ 0.34
TGFAP01135 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.19■□□□□ 0.34
TGFAP01135 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TGFAP01135 AC093323.1-202ENST00000635031 2045 ntBASIC17.19■□□□□ 0.34
TGFAP01135 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TGFAP01135 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TGFAP01135 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TGFAP01135 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TGFAP01135 AC092053.2-201ENST00000640557 1818 ntBASIC17.19■□□□□ 0.34
TGFAP01135 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TGFAP01135 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
TGFAP01135 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TGFAP01135 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.18■□□□□ 0.34
TGFAP01135 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TGFAP01135 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TGFAP01135 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.18■□□□□ 0.34
TGFAP01135 KRT17P1-201ENST00000399211 1546 ntBASIC17.18■□□□□ 0.34
TGFAP01135 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
TGFAP01135 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TGFAP01135 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.18■□□□□ 0.34
TGFAP01135 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.18■□□□□ 0.34
TGFAP01135 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TGFAP01135 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TGFAP01135 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.18■□□□□ 0.34
TGFAP01135 FAM21FP-204ENST00000608637 956 ntBASIC17.18■□□□□ 0.34
TGFAP01135 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.18■□□□□ 0.34
TGFAP01135 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms