Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC9.46□□□□□ -0.89
USH2AO75445 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
USH2AO75445 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC9.46□□□□□ -0.89
USH2AO75445 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
USH2AO75445 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
USH2AO75445 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
USH2AO75445 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
USH2AO75445 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC9.46□□□□□ -0.89
USH2AO75445 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
USH2AO75445 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
USH2AO75445 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
USH2AO75445 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC9.46□□□□□ -0.9
USH2AO75445 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
USH2AO75445 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
USH2AO75445 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
USH2AO75445 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
USH2AO75445 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
USH2AO75445 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
USH2AO75445 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC9.46□□□□□ -0.9
USH2AO75445 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC9.46□□□□□ -0.9
USH2AO75445 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
USH2AO75445 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
USH2AO75445 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.9
USH2AO75445 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
USH2AO75445 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC9.46□□□□□ -0.9
USH2AO75445 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
USH2AO75445 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC9.46□□□□□ -0.9
USH2AO75445 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC9.46□□□□□ -0.9
USH2AO75445 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC9.46□□□□□ -0.9
USH2AO75445 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
USH2AO75445 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
USH2AO75445 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 BX664615.1-201ENST00000443558 458 ntBASIC9.45□□□□□ -0.9
USH2AO75445 KRT18P16-201ENST00000510337 1294 ntBASIC9.45□□□□□ -0.9
USH2AO75445 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC9.45□□□□□ -0.9
USH2AO75445 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
USH2AO75445 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
USH2AO75445 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 AC087633.2-202ENST00000565166 1439 ntBASIC9.45□□□□□ -0.9
USH2AO75445 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 SRI-203ENST00000419179 1307 ntTSL 2 BASIC9.45□□□□□ -0.9
USH2AO75445 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC9.45□□□□□ -0.9
USH2AO75445 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC9.45□□□□□ -0.9
USH2AO75445 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC9.45□□□□□ -0.9
USH2AO75445 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC9.45□□□□□ -0.9
USH2AO75445 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC9.45□□□□□ -0.9
USH2AO75445 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 GUK1-204ENST00000366721 689 ntTSL 3 BASIC9.45□□□□□ -0.9
USH2AO75445 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 FXN-202ENST00000396364 980 ntTSL 5 BASIC9.45□□□□□ -0.9
USH2AO75445 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
USH2AO75445 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC9.45□□□□□ -0.9
USH2AO75445 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC9.45□□□□□ -0.9
USH2AO75445 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC9.45□□□□□ -0.9
USH2AO75445 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
USH2AO75445 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
USH2AO75445 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
USH2AO75445 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
USH2AO75445 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
USH2AO75445 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
USH2AO75445 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC9.44□□□□□ -0.9
USH2AO75445 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC9.44□□□□□ -0.9
USH2AO75445 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
USH2AO75445 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC9.44□□□□□ -0.9
USH2AO75445 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
USH2AO75445 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
USH2AO75445 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC9.44□□□□□ -0.9
USH2AO75445 AP006587.3-201ENST00000525742 1516 ntBASIC9.44□□□□□ -0.9
USH2AO75445 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC9.44□□□□□ -0.9
USH2AO75445 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC9.44□□□□□ -0.9
USH2AO75445 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
USH2AO75445 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC9.44□□□□□ -0.9
USH2AO75445 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC9.44□□□□□ -0.9
USH2AO75445 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
USH2AO75445 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
USH2AO75445 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
USH2AO75445 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC9.44□□□□□ -0.9
USH2AO75445 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
USH2AO75445 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
USH2AO75445 CLN6-204ENST00000564752 900 ntTSL 3 BASIC9.44□□□□□ -0.9
USH2AO75445 AC100791.3-201ENST00000617619 330 ntBASIC9.44□□□□□ -0.9
USH2AO75445 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
USH2AO75445 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
USH2AO75445 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
USH2AO75445 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
USH2AO75445 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC9.44□□□□□ -0.9
USH2AO75445 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
USH2AO75445 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
USH2AO75445 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC9.44□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms