Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PRAMEF11O60813 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF11O60813 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.28■■□□□ 1
PRAMEF11O60813 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF11O60813 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF11O60813 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF11O60813 AC004911.1-201ENST00000416316 871 ntBASIC21.28■■□□□ 1
PRAMEF11O60813 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.28■■□□□ 1
PRAMEF11O60813 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.28■■□□□ 1
PRAMEF11O60813 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PRAMEF11O60813 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF11O60813 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.28■■□□□ 1
PRAMEF11O60813 AC010536.3-201ENST00000620306 533 ntBASIC21.28■■□□□ 1
PRAMEF11O60813 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.28■■□□□ 1
PRAMEF11O60813 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF11O60813 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PRAMEF11O60813 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.28■■□□□ 1
PRAMEF11O60813 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PRAMEF11O60813 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
PRAMEF11O60813 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.27■■□□□ 1
PRAMEF11O60813 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.27■■□□□ 1
PRAMEF11O60813 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF11O60813 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF11O60813 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF11O60813 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
PRAMEF11O60813 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF11O60813 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF11O60813 AC243732.1-201ENST00000612648 864 ntBASIC21.27■■□□□ 1
PRAMEF11O60813 RARRES2P11-201ENST00000635158 484 ntBASIC21.27■■□□□ 1
PRAMEF11O60813 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF11O60813 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
PRAMEF11O60813 RBM17P2-201ENST00000616397 1405 ntBASIC21.27■■□□□ 1
PRAMEF11O60813 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRAMEF11O60813 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
PRAMEF11O60813 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF11O60813 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF11O60813 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF11O60813 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF11O60813 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF11O60813 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF11O60813 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF11O60813 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF11O60813 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.26■□□□□ 0.99
PRAMEF11O60813 AC245052.3-201ENST00000450182 901 ntBASIC21.26■□□□□ 0.99
PRAMEF11O60813 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.26■□□□□ 0.99
PRAMEF11O60813 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC21.26■□□□□ 0.99
PRAMEF11O60813 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.26■□□□□ 0.99
PRAMEF11O60813 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
PRAMEF11O60813 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.26■□□□□ 0.99
PRAMEF11O60813 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF11O60813 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PRAMEF11O60813 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRAMEF11O60813 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.26■□□□□ 0.99
PRAMEF11O60813 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.25■□□□□ 0.99
PRAMEF11O60813 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF11O60813 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
PRAMEF11O60813 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF11O60813 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.25■□□□□ 0.99
PRAMEF11O60813 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
PRAMEF11O60813 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF11O60813 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC21.25■□□□□ 0.99
PRAMEF11O60813 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF11O60813 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.25■□□□□ 0.99
PRAMEF11O60813 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
PRAMEF11O60813 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF11O60813 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
PRAMEF11O60813 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF11O60813 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF11O60813 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRAMEF11O60813 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF11O60813 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.24■□□□□ 0.99
PRAMEF11O60813 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF11O60813 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF11O60813 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PRAMEF11O60813 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF11O60813 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF11O60813 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF11O60813 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
PRAMEF11O60813 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF11O60813 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.24■□□□□ 0.99
PRAMEF11O60813 TERF1P5-201ENST00000477545 1207 ntBASIC21.24■□□□□ 0.99
PRAMEF11O60813 DLX3-202ENST00000512495 834 ntTSL 2 BASIC21.24■□□□□ 0.99
PRAMEF11O60813 DUX4L16-201ENST00000555130 1264 ntBASIC21.24■□□□□ 0.99
PRAMEF11O60813 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.24■□□□□ 0.99
PRAMEF11O60813 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF11O60813 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
PRAMEF11O60813 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PRAMEF11O60813 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF11O60813 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PRAMEF11O60813 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.24■□□□□ 0.99
PRAMEF11O60813 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF11O60813 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRAMEF11O60813 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.24■□□□□ 0.99
PRAMEF11O60813 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.23■□□□□ 0.99
PRAMEF11O60813 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.23■□□□□ 0.99
PRAMEF11O60813 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.23■□□□□ 0.99
PRAMEF11O60813 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC21.23■□□□□ 0.99
PRAMEF11O60813 AC080038.1-201ENST00000611274 1154 ntBASIC21.23■□□□□ 0.99
PRAMEF11O60813 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRAMEF11O60813 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms