Protein–RNA interactions for Protein: A0A0J9YX44

TRBV5-5, T-cell receptor beta variable 5-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-5A0A0J9YX44 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TRBV5-5A0A0J9YX44 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-5A0A0J9YX44 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-5A0A0J9YX44 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-5A0A0J9YX44 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
TRBV5-5A0A0J9YX44 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-5A0A0J9YX44 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.15■□□□□ 0.5
TRBV5-5A0A0J9YX44 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-5A0A0J9YX44 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TRBV5-5A0A0J9YX44 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
TRBV5-5A0A0J9YX44 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRBV5-5A0A0J9YX44 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
TRBV5-5A0A0J9YX44 AC055733.4-201ENST00000638462 1354 ntBASIC18.15■□□□□ 0.5
TRBV5-5A0A0J9YX44 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRBV5-5A0A0J9YX44 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.14■□□□□ 0.5
TRBV5-5A0A0J9YX44 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRBV5-5A0A0J9YX44 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.14■□□□□ 0.5
TRBV5-5A0A0J9YX44 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRBV5-5A0A0J9YX44 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 AL162377.1-201ENST00000618844 1793 ntBASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 AC009237.3-201ENST00000393279 1427 ntBASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRBV5-5A0A0J9YX44 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.13■□□□□ 0.49
TRBV5-5A0A0J9YX44 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV5-5A0A0J9YX44 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV5-5A0A0J9YX44 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
TRBV5-5A0A0J9YX44 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBV5-5A0A0J9YX44 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
TRBV5-5A0A0J9YX44 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBV5-5A0A0J9YX44 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.12■□□□□ 0.49
TRBV5-5A0A0J9YX44 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.12■□□□□ 0.49
TRBV5-5A0A0J9YX44 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRBV5-5A0A0J9YX44 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
TRBV5-5A0A0J9YX44 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
TRBV5-5A0A0J9YX44 AL391422.3-201ENST00000603791 2761 ntBASIC18.12■□□□□ 0.49
TRBV5-5A0A0J9YX44 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.12■□□□□ 0.49
TRBV5-5A0A0J9YX44 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV5-5A0A0J9YX44 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV5-5A0A0J9YX44 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRBV5-5A0A0J9YX44 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 AC007952.6-201ENST00000573168 2673 ntBASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 AC003957.1-201ENST00000625108 2673 ntBASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 BX842568.3-201ENST00000418104 571 ntBASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRBV5-5A0A0J9YX44 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms