Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 AC026310.3-201ENST00000625186 2373 ntBASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.04■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.04■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.04■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 AC061975.6-201ENST00000579045 1553 ntBASIC19.03■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.03■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 KRT18P20-201ENST00000548986 1279 ntBASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 AC080038.1-201ENST00000611274 1154 ntBASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TNFSF12-TNFSF13A0A0A6YY99 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.01■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 AC120498.10-201ENST00000621827 505 ntBASIC19.01■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.01■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.01■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.01■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 FEM1AP4-201ENST00000443167 1987 ntBASIC19■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.99■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 AC007375.3-201ENST00000600936 2314 ntBASIC18.99■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.99■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TNFSF12-TNFSF13A0A0A6YY99 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms