Protein–RNA interactions for Protein: Q9Y333

LSM2, U6 snRNA-associated Sm-like protein LSm2, humanhuman

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2Q9Y333 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
LSM2Q9Y333 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
LSM2Q9Y333 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LSM2Q9Y333 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LSM2Q9Y333 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LSM2Q9Y333 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LSM2Q9Y333 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM2Q9Y333 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM2Q9Y333 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.64■□□□□ 0.57
LSM2Q9Y333 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.64■□□□□ 0.57
LSM2Q9Y333 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM2Q9Y333 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM2Q9Y333 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LSM2Q9Y333 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM2Q9Y333 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
LSM2Q9Y333 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.63■□□□□ 0.57
LSM2Q9Y333 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM2Q9Y333 AC099778.1-201ENST00000568593 1911 ntBASIC18.63■□□□□ 0.57
LSM2Q9Y333 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.63■□□□□ 0.57
LSM2Q9Y333 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM2Q9Y333 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.63■□□□□ 0.57
LSM2Q9Y333 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.63■□□□□ 0.57
LSM2Q9Y333 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.63■□□□□ 0.57
LSM2Q9Y333 AL117332.1-201ENST00000622628 974 ntBASIC18.63■□□□□ 0.57
LSM2Q9Y333 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.63■□□□□ 0.57
LSM2Q9Y333 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LSM2Q9Y333 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.62■□□□□ 0.57
LSM2Q9Y333 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM2Q9Y333 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM2Q9Y333 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.62■□□□□ 0.57
LSM2Q9Y333 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM2Q9Y333 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.62■□□□□ 0.57
LSM2Q9Y333 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM2Q9Y333 AP006587.3-201ENST00000525742 1516 ntBASIC18.62■□□□□ 0.57
LSM2Q9Y333 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.62■□□□□ 0.57
LSM2Q9Y333 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.62■□□□□ 0.57
LSM2Q9Y333 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM2Q9Y333 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM2Q9Y333 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LSM2Q9Y333 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.62■□□□□ 0.57
LSM2Q9Y333 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM2Q9Y333 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM2Q9Y333 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM2Q9Y333 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM2Q9Y333 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LSM2Q9Y333 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM2Q9Y333 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM2Q9Y333 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM2Q9Y333 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM2Q9Y333 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LSM2Q9Y333 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.61■□□□□ 0.57
LSM2Q9Y333 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.61■□□□□ 0.57
LSM2Q9Y333 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM2Q9Y333 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM2Q9Y333 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LSM2Q9Y333 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.61■□□□□ 0.57
LSM2Q9Y333 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
LSM2Q9Y333 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LSM2Q9Y333 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LSM2Q9Y333 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LSM2Q9Y333 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LSM2Q9Y333 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.6■□□□□ 0.57
LSM2Q9Y333 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LSM2Q9Y333 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LSM2Q9Y333 AL020996.1-203ENST00000536896 2307 ntBASIC18.6■□□□□ 0.57
LSM2Q9Y333 AC087289.5-201ENST00000586076 3175 ntBASIC18.6■□□□□ 0.57
LSM2Q9Y333 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.6■□□□□ 0.57
LSM2Q9Y333 SMG8-203ENST00000578922 2178 ntBASIC18.6■□□□□ 0.57
LSM2Q9Y333 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LSM2Q9Y333 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.6■□□□□ 0.57
LSM2Q9Y333 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.6■□□□□ 0.57
LSM2Q9Y333 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
LSM2Q9Y333 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM2Q9Y333 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
LSM2Q9Y333 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM2Q9Y333 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LSM2Q9Y333 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
LSM2Q9Y333 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
LSM2Q9Y333 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM2Q9Y333 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM2Q9Y333 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.59■□□□□ 0.57
LSM2Q9Y333 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSM2Q9Y333 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
LSM2Q9Y333 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
LSM2Q9Y333 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
LSM2Q9Y333 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM2Q9Y333 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM2Q9Y333 AC010997.5-201ENST00000609182 354 ntBASIC18.59■□□□□ 0.57
LSM2Q9Y333 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM2Q9Y333 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM2Q9Y333 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.59■□□□□ 0.57
LSM2Q9Y333 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LSM2Q9Y333 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.59■□□□□ 0.57
LSM2Q9Y333 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSM2Q9Y333 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSM2Q9Y333 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.58■□□□□ 0.57
LSM2Q9Y333 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
LSM2Q9Y333 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.58■□□□□ 0.57
LSM2Q9Y333 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LSM2Q9Y333 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms