Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP2BQ9UQN3 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 AL136162.1-201ENST00000607711 1078 ntBASIC21.29■■□□□ 1
CHMP2BQ9UQN3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP2BQ9UQN3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.28■■□□□ 1
CHMP2BQ9UQN3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP2BQ9UQN3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.28■■□□□ 1
CHMP2BQ9UQN3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP2BQ9UQN3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.28■■□□□ 1
CHMP2BQ9UQN3 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMP2BQ9UQN3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMP2BQ9UQN3 IGHV3-19-201ENST00000521488 291 ntBASIC21.28■■□□□ 1
CHMP2BQ9UQN3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMP2BQ9UQN3 AC092667.1-201ENST00000434301 2586 ntBASIC21.28■■□□□ 1
CHMP2BQ9UQN3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.28■■□□□ 1
CHMP2BQ9UQN3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC21.28■■□□□ 1
CHMP2BQ9UQN3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP2BQ9UQN3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMP2BQ9UQN3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP2BQ9UQN3 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP2BQ9UQN3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.27■■□□□ 1
CHMP2BQ9UQN3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHMP2BQ9UQN3 PLK5-205ENST00000642079 1969 ntBASIC21.27■■□□□ 1
CHMP2BQ9UQN3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CHMP2BQ9UQN3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP2BQ9UQN3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP2BQ9UQN3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CHMP2BQ9UQN3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP2BQ9UQN3 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CHMP2BQ9UQN3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.27■■□□□ 1
CHMP2BQ9UQN3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP2BQ9UQN3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP2BQ9UQN3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP2BQ9UQN3 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
CHMP2BQ9UQN3 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.27■□□□□ 0.99
CHMP2BQ9UQN3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP2BQ9UQN3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.26■□□□□ 0.99
CHMP2BQ9UQN3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP2BQ9UQN3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP2BQ9UQN3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP2BQ9UQN3 AC006128.1-201ENST00000624704 1661 ntBASIC21.26■□□□□ 0.99
CHMP2BQ9UQN3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP2BQ9UQN3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.26■□□□□ 0.99
CHMP2BQ9UQN3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP2BQ9UQN3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.26■□□□□ 0.99
CHMP2BQ9UQN3 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CHMP2BQ9UQN3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP2BQ9UQN3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP2BQ9UQN3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP2BQ9UQN3 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CHMP2BQ9UQN3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP2BQ9UQN3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.25■□□□□ 0.99
CHMP2BQ9UQN3 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP2BQ9UQN3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CHMP2BQ9UQN3 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP2BQ9UQN3 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP2BQ9UQN3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC21.25■□□□□ 0.99
CHMP2BQ9UQN3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
CHMP2BQ9UQN3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.25■□□□□ 0.99
CHMP2BQ9UQN3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP2BQ9UQN3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CHMP2BQ9UQN3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CHMP2BQ9UQN3 AC135279.3-201ENST00000610945 1311 ntBASIC21.25■□□□□ 0.99
CHMP2BQ9UQN3 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP2BQ9UQN3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP2BQ9UQN3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.24■□□□□ 0.99
CHMP2BQ9UQN3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms