Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 AL596275.1-201ENST00000423464 877 ntBASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC31.46■■■□□ 2.63
SHANK2Q9UPX8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC31.45■■■□□ 2.63
SHANK2Q9UPX8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC31.45■■■□□ 2.63
SHANK2Q9UPX8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC31.45■■■□□ 2.63
SHANK2Q9UPX8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC31.45■■■□□ 2.63
SHANK2Q9UPX8 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC31.45■■■□□ 2.62
SHANK2Q9UPX8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
SHANK2Q9UPX8 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
SHANK2Q9UPX8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.62
SHANK2Q9UPX8 UNC93B5-201ENST00000530315 699 ntBASIC31.45■■■□□ 2.62
SHANK2Q9UPX8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
SHANK2Q9UPX8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SHANK2Q9UPX8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC31.44■■■□□ 2.62
SHANK2Q9UPX8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SHANK2Q9UPX8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC31.44■■■□□ 2.62
SHANK2Q9UPX8 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
SHANK2Q9UPX8 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SHANK2Q9UPX8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SHANK2Q9UPX8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC31.44■■■□□ 2.62
SHANK2Q9UPX8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
SHANK2Q9UPX8 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC31.44■■■□□ 2.62
SHANK2Q9UPX8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SHANK2Q9UPX8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SHANK2Q9UPX8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SHANK2Q9UPX8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC31.43■■■□□ 2.62
SHANK2Q9UPX8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
SHANK2Q9UPX8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SHANK2Q9UPX8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SHANK2Q9UPX8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC31.43■■■□□ 2.62
SHANK2Q9UPX8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SHANK2Q9UPX8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC31.43■■■□□ 2.62
SHANK2Q9UPX8 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SHANK2Q9UPX8 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SHANK2Q9UPX8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SHANK2Q9UPX8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC31.42■■■□□ 2.62
SHANK2Q9UPX8 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SHANK2Q9UPX8 GCSHP5-201ENST00000443090 522 ntBASIC31.42■■■□□ 2.62
SHANK2Q9UPX8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SHANK2Q9UPX8 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SHANK2Q9UPX8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC31.42■■■□□ 2.62
SHANK2Q9UPX8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SHANK2Q9UPX8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC31.42■■■□□ 2.62
SHANK2Q9UPX8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SHANK2Q9UPX8 OR2A1-AS1-201ENST00000462305 773 ntBASIC31.41■■■□□ 2.62
SHANK2Q9UPX8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC31.41■■■□□ 2.62
SHANK2Q9UPX8 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC31.41■■■□□ 2.62
SHANK2Q9UPX8 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC31.41■■■□□ 2.62
SHANK2Q9UPX8 AP006294.2-201ENST00000641667 209 ntBASIC31.41■■■□□ 2.62
SHANK2Q9UPX8 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC31.41■■■□□ 2.62
SHANK2Q9UPX8 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SHANK2Q9UPX8 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SHANK2Q9UPX8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
SHANK2Q9UPX8 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SHANK2Q9UPX8 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SHANK2Q9UPX8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SHANK2Q9UPX8 AL355472.2-201ENST00000422958 438 ntBASIC31.4■■■□□ 2.62
SHANK2Q9UPX8 CDV3P1-201ENST00000471403 739 ntBASIC31.4■■■□□ 2.62
SHANK2Q9UPX8 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC31.4■■■□□ 2.62
SHANK2Q9UPX8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC31.4■■■□□ 2.62
SHANK2Q9UPX8 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC31.4■■■□□ 2.62
SHANK2Q9UPX8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SHANK2Q9UPX8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SHANK2Q9UPX8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SHANK2Q9UPX8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC31.4■■■□□ 2.62
SHANK2Q9UPX8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SHANK2Q9UPX8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC31.4■■■□□ 2.62
SHANK2Q9UPX8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC31.4■■■□□ 2.62
SHANK2Q9UPX8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC31.4■■■□□ 2.62
SHANK2Q9UPX8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SHANK2Q9UPX8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SHANK2Q9UPX8 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC31.39■■■□□ 2.62
SHANK2Q9UPX8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SHANK2Q9UPX8 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SHANK2Q9UPX8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SHANK2Q9UPX8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC31.39■■■□□ 2.62
SHANK2Q9UPX8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC31.39■■■□□ 2.62
SHANK2Q9UPX8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC31.39■■■□□ 2.62
SHANK2Q9UPX8 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC31.39■■■□□ 2.62
SHANK2Q9UPX8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SHANK2Q9UPX8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC31.38■■■□□ 2.61
SHANK2Q9UPX8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC31.38■■■□□ 2.61
SHANK2Q9UPX8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
SHANK2Q9UPX8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
SHANK2Q9UPX8 AP003097.1-201ENST00000530657 1135 ntBASIC31.38■■■□□ 2.61
SHANK2Q9UPX8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC31.37■■■□□ 2.61
SHANK2Q9UPX8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SHANK2Q9UPX8 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
SHANK2Q9UPX8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SHANK2Q9UPX8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SHANK2Q9UPX8 ESRRAP1-201ENST00000400596 1257 ntBASIC31.37■■■□□ 2.61
SHANK2Q9UPX8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC31.37■■■□□ 2.61
SHANK2Q9UPX8 AC007322.3-201ENST00000426526 701 ntBASIC31.37■■■□□ 2.61
SHANK2Q9UPX8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
SHANK2Q9UPX8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms