Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.11■□□□□ 0.17
NOTCH3Q9UM47 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 BX276092.2-201ENST00000417668 665 ntBASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 DUSP5P2-201ENST00000426873 1033 ntBASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 AL034346.1-201ENST00000568244 1277 ntBASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 AC091874.3-201ENST00000512672 1195 ntBASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 EEF1DP3-203ENST00000566025 782 ntBASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 OR10C1-204ENST00000622521 1039 ntBASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.1■□□□□ 0.17
NOTCH3Q9UM47 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
NOTCH3Q9UM47 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
NOTCH3Q9UM47 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
NOTCH3Q9UM47 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.08■□□□□ 0.17
NOTCH3Q9UM47 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.08■□□□□ 0.17
NOTCH3Q9UM47 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.08■□□□□ 0.17
NOTCH3Q9UM47 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.08■□□□□ 0.17
NOTCH3Q9UM47 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.08■□□□□ 0.17
NOTCH3Q9UM47 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.08■□□□□ 0.17
NOTCH3Q9UM47 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
NOTCH3Q9UM47 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NOTCH3Q9UM47 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NOTCH3Q9UM47 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
NOTCH3Q9UM47 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.08■□□□□ 0.17
NOTCH3Q9UM47 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NOTCH3Q9UM47 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NOTCH3Q9UM47 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
NOTCH3Q9UM47 KRT16P2-201ENST00000414673 1423 ntBASIC16.08■□□□□ 0.16
NOTCH3Q9UM47 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
NOTCH3Q9UM47 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NOTCH3Q9UM47 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NOTCH3Q9UM47 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NOTCH3Q9UM47 POU5F1P4-201ENST00000413175 1085 ntBASIC16.08■□□□□ 0.16
NOTCH3Q9UM47 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NOTCH3Q9UM47 AC006058.3-201ENST00000606217 1069 ntBASIC16.08■□□□□ 0.16
NOTCH3Q9UM47 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.08■□□□□ 0.16
NOTCH3Q9UM47 AC092118.2-201ENST00000613495 667 ntBASIC16.08■□□□□ 0.16
NOTCH3Q9UM47 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NOTCH3Q9UM47 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NOTCH3Q9UM47 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC16.08■□□□□ 0.16
NOTCH3Q9UM47 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 AC128676.1-201ENST00000454392 318 ntBASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 AC137767.1-201ENST00000602918 1920 ntBASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NOTCH3Q9UM47 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms