Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN2Q9UHD9 MIR4508-201ENST00000584178 70 ntBASIC17.63■□□□□ 0.41
UBQLN2Q9UHD9 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.63■□□□□ 0.41
UBQLN2Q9UHD9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN2Q9UHD9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN2Q9UHD9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN2Q9UHD9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
UBQLN2Q9UHD9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
UBQLN2Q9UHD9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN2Q9UHD9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 OXCT2P1-201ENST00000447263 1535 ntBASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
UBQLN2Q9UHD9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 AL592295.1-201ENST00000400984 884 ntBASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN2Q9UHD9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 AC103724.3-201ENST00000564481 992 ntBASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 TNXA-203ENST00000507684 2038 ntBASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
UBQLN2Q9UHD9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 AC073314.1-201ENST00000568729 2216 ntBASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBQLN2Q9UHD9 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.58■□□□□ 0.41
UBQLN2Q9UHD9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN2Q9UHD9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.58■□□□□ 0.41
UBQLN2Q9UHD9 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN2Q9UHD9 AC004408.2-201ENST00000623613 2777 ntBASIC17.58■□□□□ 0.41
UBQLN2Q9UHD9 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
UBQLN2Q9UHD9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN2Q9UHD9 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN2Q9UHD9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN2Q9UHD9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
UBQLN2Q9UHD9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms