Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
VTI1BQ9UEU0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VTI1BQ9UEU0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
VTI1BQ9UEU0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
VTI1BQ9UEU0 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
VTI1BQ9UEU0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VTI1BQ9UEU0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTI1BQ9UEU0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTI1BQ9UEU0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
VTI1BQ9UEU0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTI1BQ9UEU0 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTI1BQ9UEU0 AC099791.1-201ENST00000416440 715 ntBASIC20.57■□□□□ 0.88
VTI1BQ9UEU0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.57■□□□□ 0.88
VTI1BQ9UEU0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
VTI1BQ9UEU0 MAG-206ENST00000597035 542 ntTSL 4 BASIC20.57■□□□□ 0.88
VTI1BQ9UEU0 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.57■□□□□ 0.88
VTI1BQ9UEU0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTI1BQ9UEU0 AL121603.2-201ENST00000557373 2117 ntBASIC20.57■□□□□ 0.88
VTI1BQ9UEU0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
VTI1BQ9UEU0 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VTI1BQ9UEU0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
VTI1BQ9UEU0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
VTI1BQ9UEU0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.56■□□□□ 0.88
VTI1BQ9UEU0 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.56■□□□□ 0.88
VTI1BQ9UEU0 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.56■□□□□ 0.88
VTI1BQ9UEU0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VTI1BQ9UEU0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
VTI1BQ9UEU0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.56■□□□□ 0.88
VTI1BQ9UEU0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.56■□□□□ 0.88
VTI1BQ9UEU0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
VTI1BQ9UEU0 AC092667.1-201ENST00000434301 2586 ntBASIC20.55■□□□□ 0.88
VTI1BQ9UEU0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.55■□□□□ 0.88
VTI1BQ9UEU0 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.55■□□□□ 0.88
VTI1BQ9UEU0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VTI1BQ9UEU0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VTI1BQ9UEU0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VTI1BQ9UEU0 AP005435.1-201ENST00000529293 1178 ntBASIC20.55■□□□□ 0.88
VTI1BQ9UEU0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
VTI1BQ9UEU0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
VTI1BQ9UEU0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
VTI1BQ9UEU0 GABARAPL3-202ENST00000624044 1851 ntBASIC20.55■□□□□ 0.88
VTI1BQ9UEU0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
VTI1BQ9UEU0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.55■□□□□ 0.88
VTI1BQ9UEU0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
VTI1BQ9UEU0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.55■□□□□ 0.88
VTI1BQ9UEU0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 AC006128.1-201ENST00000624704 1661 ntBASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 AC126544.1-201ENST00000580842 1059 ntBASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
VTI1BQ9UEU0 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
VTI1BQ9UEU0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
VTI1BQ9UEU0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms