Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 RARRES2P4-201ENST00000514074 484 ntBASIC20.31■□□□□ 0.84
LRIT1Q9P2V4 MIR4651-201ENST00000582622 73 ntBASIC20.31■□□□□ 0.84
LRIT1Q9P2V4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.31■□□□□ 0.84
LRIT1Q9P2V4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LRIT1Q9P2V4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.31■□□□□ 0.84
LRIT1Q9P2V4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRIT1Q9P2V4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
LRIT1Q9P2V4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRIT1Q9P2V4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 AC233723.2-201ENST00000623798 2106 ntBASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 FAM99A-202ENST00000538190 1989 ntBASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRIT1Q9P2V4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 AC010980.2-201ENST00000587099 1412 ntBASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 FAM201B-201ENST00000458407 597 ntBASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
LRIT1Q9P2V4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRIT1Q9P2V4 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRIT1Q9P2V4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRIT1Q9P2V4 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
LRIT1Q9P2V4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRIT1Q9P2V4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRIT1Q9P2V4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.28■□□□□ 0.84
LRIT1Q9P2V4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.28■□□□□ 0.84
LRIT1Q9P2V4 RNA5SP413-201ENST00000516373 109 ntBASIC20.28■□□□□ 0.84
LRIT1Q9P2V4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC20.28■□□□□ 0.84
LRIT1Q9P2V4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.28■□□□□ 0.84
LRIT1Q9P2V4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRIT1Q9P2V4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRIT1Q9P2V4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
LRIT1Q9P2V4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
LRIT1Q9P2V4 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.28■□□□□ 0.84
LRIT1Q9P2V4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRIT1Q9P2V4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRIT1Q9P2V4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.27■□□□□ 0.84
LRIT1Q9P2V4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRIT1Q9P2V4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRIT1Q9P2V4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
LRIT1Q9P2V4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.27■□□□□ 0.84
LRIT1Q9P2V4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.27■□□□□ 0.84
LRIT1Q9P2V4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRIT1Q9P2V4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
LRIT1Q9P2V4 C11orf96-202ENST00000528572 1834 ntBASIC20.27■□□□□ 0.84
LRIT1Q9P2V4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LRIT1Q9P2V4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LRIT1Q9P2V4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRIT1Q9P2V4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRIT1Q9P2V4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LRIT1Q9P2V4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.26■□□□□ 0.83
LRIT1Q9P2V4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.26■□□□□ 0.83
LRIT1Q9P2V4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LRIT1Q9P2V4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRIT1Q9P2V4 AC245052.3-201ENST00000450182 901 ntBASIC20.26■□□□□ 0.83
LRIT1Q9P2V4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.26■□□□□ 0.83
LRIT1Q9P2V4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.26■□□□□ 0.83
LRIT1Q9P2V4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRIT1Q9P2V4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.26■□□□□ 0.83
LRIT1Q9P2V4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.26■□□□□ 0.83
LRIT1Q9P2V4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.26■□□□□ 0.83
LRIT1Q9P2V4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRIT1Q9P2V4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms