Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.5■■□□□ 1.51
SH2D4AQ9H788 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC24.5■■□□□ 1.51
SH2D4AQ9H788 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
SH2D4AQ9H788 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SH2D4AQ9H788 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
SH2D4AQ9H788 FAM99A-202ENST00000538190 1989 ntBASIC24.49■■□□□ 1.51
SH2D4AQ9H788 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SH2D4AQ9H788 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SH2D4AQ9H788 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.49■■□□□ 1.51
SH2D4AQ9H788 AC245052.3-201ENST00000450182 901 ntBASIC24.49■■□□□ 1.51
SH2D4AQ9H788 RARRES2P4-201ENST00000514074 484 ntBASIC24.49■■□□□ 1.51
SH2D4AQ9H788 AC098934.4-201ENST00000564127 592 ntBASIC24.49■■□□□ 1.51
SH2D4AQ9H788 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC24.49■■□□□ 1.51
SH2D4AQ9H788 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.49■■□□□ 1.51
SH2D4AQ9H788 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC24.49■■□□□ 1.51
SH2D4AQ9H788 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
SH2D4AQ9H788 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
SH2D4AQ9H788 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
SH2D4AQ9H788 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.49■■□□□ 1.51
SH2D4AQ9H788 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SH2D4AQ9H788 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
SH2D4AQ9H788 PPP1R14BP2-201ENST00000426284 444 ntBASIC24.48■■□□□ 1.51
SH2D4AQ9H788 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.48■■□□□ 1.51
SH2D4AQ9H788 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.48■■□□□ 1.51
SH2D4AQ9H788 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.48■■□□□ 1.51
SH2D4AQ9H788 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC24.48■■□□□ 1.51
SH2D4AQ9H788 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.47■■□□□ 1.51
SH2D4AQ9H788 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.47■■□□□ 1.51
SH2D4AQ9H788 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SH2D4AQ9H788 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC24.47■■□□□ 1.51
SH2D4AQ9H788 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SH2D4AQ9H788 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SH2D4AQ9H788 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.47■■□□□ 1.51
SH2D4AQ9H788 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SH2D4AQ9H788 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SH2D4AQ9H788 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
SH2D4AQ9H788 AC026471.6-201ENST00000622954 1905 ntBASIC24.47■■□□□ 1.51
SH2D4AQ9H788 AL117328.2-201ENST00000624617 1940 ntBASIC24.47■■□□□ 1.51
SH2D4AQ9H788 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
SH2D4AQ9H788 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SH2D4AQ9H788 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SH2D4AQ9H788 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC24.46■■□□□ 1.51
SH2D4AQ9H788 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.46■■□□□ 1.51
SH2D4AQ9H788 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SH2D4AQ9H788 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC24.46■■□□□ 1.51
SH2D4AQ9H788 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SH2D4AQ9H788 BX276092.2-201ENST00000417668 665 ntBASIC24.46■■□□□ 1.51
SH2D4AQ9H788 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC24.46■■□□□ 1.51
SH2D4AQ9H788 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SH2D4AQ9H788 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.46■■□□□ 1.51
SH2D4AQ9H788 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SH2D4AQ9H788 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC24.46■■□□□ 1.51
SH2D4AQ9H788 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SH2D4AQ9H788 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC24.45■■□□□ 1.51
SH2D4AQ9H788 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.51
SH2D4AQ9H788 AC010542.4-201ENST00000563151 1910 ntBASIC24.45■■□□□ 1.51
SH2D4AQ9H788 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SH2D4AQ9H788 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
SH2D4AQ9H788 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SH2D4AQ9H788 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.45■■□□□ 1.5
SH2D4AQ9H788 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SH2D4AQ9H788 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
SH2D4AQ9H788 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SH2D4AQ9H788 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
SH2D4AQ9H788 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SH2D4AQ9H788 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SH2D4AQ9H788 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC24.44■■□□□ 1.5
SH2D4AQ9H788 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.44■■□□□ 1.5
SH2D4AQ9H788 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.44■■□□□ 1.5
SH2D4AQ9H788 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC24.44■■□□□ 1.5
SH2D4AQ9H788 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC24.44■■□□□ 1.5
SH2D4AQ9H788 TMEM191A-211ENST00000637163 1067 ntBASIC24.44■■□□□ 1.5
SH2D4AQ9H788 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SH2D4AQ9H788 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
SH2D4AQ9H788 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SH2D4AQ9H788 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC24.44■■□□□ 1.5
SH2D4AQ9H788 AC010980.2-201ENST00000587099 1412 ntBASIC24.44■■□□□ 1.5
SH2D4AQ9H788 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.43■■□□□ 1.5
SH2D4AQ9H788 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
SH2D4AQ9H788 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SH2D4AQ9H788 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC24.43■■□□□ 1.5
SH2D4AQ9H788 TSPY20P-201ENST00000450910 630 ntBASIC24.43■■□□□ 1.5
SH2D4AQ9H788 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC24.43■■□□□ 1.5
SH2D4AQ9H788 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SH2D4AQ9H788 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.43■■□□□ 1.5
SH2D4AQ9H788 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SH2D4AQ9H788 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.43■■□□□ 1.5
SH2D4AQ9H788 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC24.43■■□□□ 1.5
SH2D4AQ9H788 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SH2D4AQ9H788 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC24.42■■□□□ 1.5
SH2D4AQ9H788 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SH2D4AQ9H788 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SH2D4AQ9H788 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SH2D4AQ9H788 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SH2D4AQ9H788 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SH2D4AQ9H788 CDV3P1-201ENST00000471403 739 ntBASIC24.42■■□□□ 1.5
SH2D4AQ9H788 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC24.42■■□□□ 1.5
SH2D4AQ9H788 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC24.42■■□□□ 1.5
SH2D4AQ9H788 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
SH2D4AQ9H788 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms