Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 AC069236.1-201ENST00000604339 616 ntBASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 OR10C1-204ENST00000622521 1039 ntBASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 AC061975.6-201ENST00000579045 1553 ntBASIC22.04■■□□□ 1.12
ATXN3LQ9H3M9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 TSPY20P-201ENST00000450910 630 ntBASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 AC098934.4-201ENST00000564127 592 ntBASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ATXN3LQ9H3M9 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATXN3LQ9H3M9 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
ATXN3LQ9H3M9 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
ATXN3LQ9H3M9 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
ATXN3LQ9H3M9 AC073210.2-201ENST00000430369 194 ntBASIC22.02■■□□□ 1.12
ATXN3LQ9H3M9 MIR4758-201ENST00000577688 71 ntBASIC22.02■■□□□ 1.12
ATXN3LQ9H3M9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC22.02■■□□□ 1.12
ATXN3LQ9H3M9 AC016405.3-201ENST00000607710 860 ntBASIC22.02■■□□□ 1.12
ATXN3LQ9H3M9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.02■■□□□ 1.12
ATXN3LQ9H3M9 TMEM191A-211ENST00000637163 1067 ntBASIC22.02■■□□□ 1.12
ATXN3LQ9H3M9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC22.02■■□□□ 1.12
ATXN3LQ9H3M9 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ATXN3LQ9H3M9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
ATXN3LQ9H3M9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 MIPEPP3-201ENST00000412105 444 ntBASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 AC093787.1-201ENST00000450396 207 ntBASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 AC079834.2-201ENST00000609776 1949 ntBASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ATXN3LQ9H3M9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
ATXN3LQ9H3M9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC22■■□□□ 1.11
ATXN3LQ9H3M9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22■■□□□ 1.11
ATXN3LQ9H3M9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC22■■□□□ 1.11
ATXN3LQ9H3M9 RBM17P2-201ENST00000616397 1405 ntBASIC22■■□□□ 1.11
ATXN3LQ9H3M9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATXN3LQ9H3M9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22■■□□□ 1.11
ATXN3LQ9H3M9 MARS-234ENST00000630571 216 ntTSL 5 BASIC22■■□□□ 1.11
ATXN3LQ9H3M9 MARS-235ENST00000630803 183 ntTSL 3 BASIC22■■□□□ 1.11
ATXN3LQ9H3M9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ATXN3LQ9H3M9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22■■□□□ 1.11
ATXN3LQ9H3M9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22■■□□□ 1.11
ATXN3LQ9H3M9 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.99■■□□□ 1.11
ATXN3LQ9H3M9 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.99■■□□□ 1.11
ATXN3LQ9H3M9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ATXN3LQ9H3M9 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
ATXN3LQ9H3M9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ATXN3LQ9H3M9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATXN3LQ9H3M9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATXN3LQ9H3M9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
ATXN3LQ9H3M9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.99■■□□□ 1.11
ATXN3LQ9H3M9 AL512625.2-201ENST00000417533 625 ntBASIC21.99■■□□□ 1.11
ATXN3LQ9H3M9 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.99■■□□□ 1.11
ATXN3LQ9H3M9 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.99■■□□□ 1.11
ATXN3LQ9H3M9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.99■■□□□ 1.11
ATXN3LQ9H3M9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms