Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.7■■□□□ 1.87
CNTNAP4Q9C0A0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
CNTNAP4Q9C0A0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC26.7■■□□□ 1.86
CNTNAP4Q9C0A0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.86
CNTNAP4Q9C0A0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.7■■□□□ 1.86
CNTNAP4Q9C0A0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC26.7■■□□□ 1.86
CNTNAP4Q9C0A0 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 C1QBPP2-201ENST00000528754 825 ntBASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 MIR4497-201ENST00000583208 89 ntBASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CNTNAP4Q9C0A0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 SAPCD2P1-201ENST00000395413 1184 ntBASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 AC233263.1-201ENST00000578059 224 ntBASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 RN7SL471P-201ENST00000580476 299 ntBASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 FAM197Y4-202ENST00000622692 608 ntBASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 AC092368.3-202ENST00000574180 1591 ntBASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CNTNAP4Q9C0A0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CNTNAP4Q9C0A0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CNTNAP4Q9C0A0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC26.67■■□□□ 1.86
CNTNAP4Q9C0A0 SLC29A4P2-201ENST00000504749 1089 ntBASIC26.67■■□□□ 1.86
CNTNAP4Q9C0A0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CNTNAP4Q9C0A0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC26.67■■□□□ 1.86
CNTNAP4Q9C0A0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC26.67■■□□□ 1.86
CNTNAP4Q9C0A0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CNTNAP4Q9C0A0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CNTNAP4Q9C0A0 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CNTNAP4Q9C0A0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CNTNAP4Q9C0A0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.67■■□□□ 1.86
CNTNAP4Q9C0A0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CNTNAP4Q9C0A0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC26.67■■□□□ 1.86
CNTNAP4Q9C0A0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CNTNAP4Q9C0A0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC26.66■■□□□ 1.86
CNTNAP4Q9C0A0 KRT17P3-201ENST00000420566 1262 ntBASIC26.66■■□□□ 1.86
CNTNAP4Q9C0A0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC26.66■■□□□ 1.86
CNTNAP4Q9C0A0 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC26.66■■□□□ 1.86
CNTNAP4Q9C0A0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC26.66■■□□□ 1.86
CNTNAP4Q9C0A0 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CNTNAP4Q9C0A0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.66■■□□□ 1.86
CNTNAP4Q9C0A0 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CNTNAP4Q9C0A0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 AC069544.1-201ENST00000609399 999 ntBASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 AC093323.1-202ENST00000635031 2045 ntBASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 KRT18P68-201ENST00000392293 1000 ntBASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 Z99916.2-201ENST00000604037 246 ntBASIC26.65■■□□□ 1.86
CNTNAP4Q9C0A0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CNTNAP4Q9C0A0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
CNTNAP4Q9C0A0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
CNTNAP4Q9C0A0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.64■■□□□ 1.86
CNTNAP4Q9C0A0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
CNTNAP4Q9C0A0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
CNTNAP4Q9C0A0 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC26.64■■□□□ 1.85
CNTNAP4Q9C0A0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC26.64■■□□□ 1.85
CNTNAP4Q9C0A0 AC073912.3-201ENST00000624414 853 ntBASIC26.64■■□□□ 1.85
CNTNAP4Q9C0A0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CNTNAP4Q9C0A0 LTK-203ENST00000453182 2412 ntTSL 2 BASIC26.63■■□□□ 1.85
CNTNAP4Q9C0A0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.63■■□□□ 1.85
CNTNAP4Q9C0A0 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CNTNAP4Q9C0A0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CNTNAP4Q9C0A0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CNTNAP4Q9C0A0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.63■■□□□ 1.85
CNTNAP4Q9C0A0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms