Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
S1PR3Q99500 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.24■□□□□ 0.35
S1PR3Q99500 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.24■□□□□ 0.35
S1PR3Q99500 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
S1PR3Q99500 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
S1PR3Q99500 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
S1PR3Q99500 AL024507.2-201ENST00000606070 2574 ntBASIC17.24■□□□□ 0.35
S1PR3Q99500 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
S1PR3Q99500 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.24■□□□□ 0.35
S1PR3Q99500 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.24■□□□□ 0.35
S1PR3Q99500 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
S1PR3Q99500 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
S1PR3Q99500 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
S1PR3Q99500 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
S1PR3Q99500 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
S1PR3Q99500 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
S1PR3Q99500 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
S1PR3Q99500 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
S1PR3Q99500 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
S1PR3Q99500 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
S1PR3Q99500 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.23■□□□□ 0.35
S1PR3Q99500 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.23■□□□□ 0.35
S1PR3Q99500 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
S1PR3Q99500 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.23■□□□□ 0.35
S1PR3Q99500 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.23■□□□□ 0.35
S1PR3Q99500 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC17.23■□□□□ 0.35
S1PR3Q99500 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.23■□□□□ 0.35
S1PR3Q99500 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.23■□□□□ 0.35
S1PR3Q99500 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
S1PR3Q99500 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
S1PR3Q99500 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
S1PR3Q99500 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
S1PR3Q99500 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
S1PR3Q99500 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.23■□□□□ 0.35
S1PR3Q99500 AC005224.4-201ENST00000583262 1652 ntBASIC17.23■□□□□ 0.35
S1PR3Q99500 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
S1PR3Q99500 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
S1PR3Q99500 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.23■□□□□ 0.35
S1PR3Q99500 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
S1PR3Q99500 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
S1PR3Q99500 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
S1PR3Q99500 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
S1PR3Q99500 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
S1PR3Q99500 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
S1PR3Q99500 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.22■□□□□ 0.35
S1PR3Q99500 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
S1PR3Q99500 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
S1PR3Q99500 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
S1PR3Q99500 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.22■□□□□ 0.35
S1PR3Q99500 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
S1PR3Q99500 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.22■□□□□ 0.35
S1PR3Q99500 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.22■□□□□ 0.35
S1PR3Q99500 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.22■□□□□ 0.35
S1PR3Q99500 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.22■□□□□ 0.35
S1PR3Q99500 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.22■□□□□ 0.35
S1PR3Q99500 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.22■□□□□ 0.35
S1PR3Q99500 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
S1PR3Q99500 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
S1PR3Q99500 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.22■□□□□ 0.35
S1PR3Q99500 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.22■□□□□ 0.35
S1PR3Q99500 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
S1PR3Q99500 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
S1PR3Q99500 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
S1PR3Q99500 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
S1PR3Q99500 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
S1PR3Q99500 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
S1PR3Q99500 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
S1PR3Q99500 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
S1PR3Q99500 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.21■□□□□ 0.35
S1PR3Q99500 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
S1PR3Q99500 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
S1PR3Q99500 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.21■□□□□ 0.35
S1PR3Q99500 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.21■□□□□ 0.35
S1PR3Q99500 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
S1PR3Q99500 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.21■□□□□ 0.35
S1PR3Q99500 AC055733.4-201ENST00000638462 1354 ntBASIC17.21■□□□□ 0.35
S1PR3Q99500 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
S1PR3Q99500 ZNRF2P3-201ENST00000424200 374 ntBASIC17.21■□□□□ 0.35
S1PR3Q99500 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
S1PR3Q99500 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC17.21■□□□□ 0.35
S1PR3Q99500 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.21■□□□□ 0.35
S1PR3Q99500 AL354811.1-201ENST00000610286 706 ntBASIC17.21■□□□□ 0.35
S1PR3Q99500 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
S1PR3Q99500 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.21■□□□□ 0.35
S1PR3Q99500 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
S1PR3Q99500 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.21■□□□□ 0.35
S1PR3Q99500 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
S1PR3Q99500 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
S1PR3Q99500 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.21■□□□□ 0.35
S1PR3Q99500 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
S1PR3Q99500 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
S1PR3Q99500 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC17.21■□□□□ 0.34
S1PR3Q99500 AC019069.1-201ENST00000610008 1333 ntBASIC17.21■□□□□ 0.34
S1PR3Q99500 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
S1PR3Q99500 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
S1PR3Q99500 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.2■□□□□ 0.34
S1PR3Q99500 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
S1PR3Q99500 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.2■□□□□ 0.34
S1PR3Q99500 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
S1PR3Q99500 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms