Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CALR3Q96L12 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CALR3Q96L12 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CALR3Q96L12 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
CALR3Q96L12 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CALR3Q96L12 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
CALR3Q96L12 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC22.14■■□□□ 1.13
CALR3Q96L12 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.14■■□□□ 1.13
CALR3Q96L12 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CALR3Q96L12 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CALR3Q96L12 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CALR3Q96L12 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.13■■□□□ 1.13
CALR3Q96L12 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC22.13■■□□□ 1.13
CALR3Q96L12 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.13■■□□□ 1.13
CALR3Q96L12 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CALR3Q96L12 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.13■■□□□ 1.13
CALR3Q96L12 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CALR3Q96L12 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CALR3Q96L12 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CALR3Q96L12 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CALR3Q96L12 AC092667.1-201ENST00000434301 2586 ntBASIC22.13■■□□□ 1.13
CALR3Q96L12 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CALR3Q96L12 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CALR3Q96L12 GABARAPL3-202ENST00000624044 1851 ntBASIC22.13■■□□□ 1.13
CALR3Q96L12 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
CALR3Q96L12 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.13■■□□□ 1.13
CALR3Q96L12 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.12■■□□□ 1.13
CALR3Q96L12 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CALR3Q96L12 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
CALR3Q96L12 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CALR3Q96L12 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CALR3Q96L12 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
CALR3Q96L12 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CALR3Q96L12 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.12■■□□□ 1.13
CALR3Q96L12 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CALR3Q96L12 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CALR3Q96L12 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CALR3Q96L12 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.12■■□□□ 1.13
CALR3Q96L12 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.11■■□□□ 1.13
CALR3Q96L12 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CALR3Q96L12 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CALR3Q96L12 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CALR3Q96L12 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
CALR3Q96L12 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CALR3Q96L12 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC22.11■■□□□ 1.13
CALR3Q96L12 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CALR3Q96L12 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CALR3Q96L12 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CALR3Q96L12 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CALR3Q96L12 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.11■■□□□ 1.13
CALR3Q96L12 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CALR3Q96L12 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CALR3Q96L12 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CALR3Q96L12 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
CALR3Q96L12 PALM-207ENST00000590161 2137 ntTSL 4 BASIC22.1■■□□□ 1.13
CALR3Q96L12 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CALR3Q96L12 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC22.1■■□□□ 1.13
CALR3Q96L12 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CALR3Q96L12 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CALR3Q96L12 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC22.1■■□□□ 1.13
CALR3Q96L12 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.1■■□□□ 1.13
CALR3Q96L12 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CALR3Q96L12 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CALR3Q96L12 AC005224.4-201ENST00000583262 1652 ntBASIC22.1■■□□□ 1.13
CALR3Q96L12 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CALR3Q96L12 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
CALR3Q96L12 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.09■■□□□ 1.13
CALR3Q96L12 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
CALR3Q96L12 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CALR3Q96L12 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CALR3Q96L12 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CALR3Q96L12 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.09■■□□□ 1.13
CALR3Q96L12 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
CALR3Q96L12 AC121338.2-201ENST00000622535 1744 ntBASIC22.09■■□□□ 1.13
CALR3Q96L12 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CALR3Q96L12 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CALR3Q96L12 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CALR3Q96L12 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CALR3Q96L12 MFF-208ENST00000409616 1247 ntTSL 5 BASIC22.09■■□□□ 1.13
CALR3Q96L12 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CALR3Q96L12 AL136162.1-201ENST00000607711 1078 ntBASIC22.09■■□□□ 1.13
CALR3Q96L12 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.09■■□□□ 1.13
CALR3Q96L12 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.09■■□□□ 1.13
CALR3Q96L12 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CALR3Q96L12 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
CALR3Q96L12 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CALR3Q96L12 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CALR3Q96L12 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CALR3Q96L12 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CALR3Q96L12 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
CALR3Q96L12 AC135279.3-201ENST00000610945 1311 ntBASIC22.08■■□□□ 1.13
CALR3Q96L12 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
CALR3Q96L12 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
CALR3Q96L12 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CALR3Q96L12 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CALR3Q96L12 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CALR3Q96L12 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.08■■□□□ 1.13
CALR3Q96L12 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.08■■□□□ 1.13
CALR3Q96L12 AC024257.2-201ENST00000549699 147 ntBASIC22.08■■□□□ 1.13
CALR3Q96L12 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms