Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 AL117328.2-201ENST00000624617 1940 ntBASIC24■■□□□ 1.43
U2AF1L4Q8WU68 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24■■□□□ 1.43
U2AF1L4Q8WU68 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC24■■□□□ 1.43
U2AF1L4Q8WU68 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24■■□□□ 1.43
U2AF1L4Q8WU68 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24■■□□□ 1.43
U2AF1L4Q8WU68 EEF1DP3-203ENST00000566025 782 ntBASIC24■■□□□ 1.43
U2AF1L4Q8WU68 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
U2AF1L4Q8WU68 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
U2AF1L4Q8WU68 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
U2AF1L4Q8WU68 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
U2AF1L4Q8WU68 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24■■□□□ 1.43
U2AF1L4Q8WU68 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 AC211429.1-201ENST00000415277 523 ntBASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.99■■□□□ 1.43
U2AF1L4Q8WU68 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
U2AF1L4Q8WU68 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
U2AF1L4Q8WU68 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
U2AF1L4Q8WU68 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
U2AF1L4Q8WU68 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
U2AF1L4Q8WU68 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC23.98■■□□□ 1.43
U2AF1L4Q8WU68 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC23.98■■□□□ 1.43
U2AF1L4Q8WU68 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC23.98■■□□□ 1.43
U2AF1L4Q8WU68 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC23.98■■□□□ 1.43
U2AF1L4Q8WU68 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
U2AF1L4Q8WU68 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
U2AF1L4Q8WU68 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
U2AF1L4Q8WU68 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
U2AF1L4Q8WU68 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
U2AF1L4Q8WU68 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
U2AF1L4Q8WU68 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
U2AF1L4Q8WU68 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
U2AF1L4Q8WU68 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
U2AF1L4Q8WU68 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
U2AF1L4Q8WU68 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
U2AF1L4Q8WU68 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.97■■□□□ 1.43
U2AF1L4Q8WU68 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
U2AF1L4Q8WU68 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.97■■□□□ 1.43
U2AF1L4Q8WU68 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC23.97■■□□□ 1.43
U2AF1L4Q8WU68 MAX-217ENST00000557277 728 ntTSL 3 BASIC23.97■■□□□ 1.43
U2AF1L4Q8WU68 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC23.97■■□□□ 1.43
U2AF1L4Q8WU68 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
U2AF1L4Q8WU68 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
U2AF1L4Q8WU68 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.96■■□□□ 1.43
U2AF1L4Q8WU68 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
U2AF1L4Q8WU68 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
U2AF1L4Q8WU68 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
U2AF1L4Q8WU68 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
U2AF1L4Q8WU68 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.96■■□□□ 1.43
U2AF1L4Q8WU68 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.96■■□□□ 1.43
U2AF1L4Q8WU68 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.96■■□□□ 1.43
U2AF1L4Q8WU68 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC23.96■■□□□ 1.43
U2AF1L4Q8WU68 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.96■■□□□ 1.43
U2AF1L4Q8WU68 AC053503.5-201ENST00000601508 636 ntBASIC23.96■■□□□ 1.43
U2AF1L4Q8WU68 REXO1L12P-201ENST00000622156 912 ntBASIC23.96■■□□□ 1.43
U2AF1L4Q8WU68 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
U2AF1L4Q8WU68 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
U2AF1L4Q8WU68 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
U2AF1L4Q8WU68 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
U2AF1L4Q8WU68 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC23.95■■□□□ 1.42
U2AF1L4Q8WU68 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.95■■□□□ 1.42
U2AF1L4Q8WU68 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
U2AF1L4Q8WU68 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.95■■□□□ 1.42
U2AF1L4Q8WU68 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
U2AF1L4Q8WU68 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC23.95■■□□□ 1.42
U2AF1L4Q8WU68 AP004607.7-201ENST00000527152 1677 ntBASIC23.95■■□□□ 1.42
U2AF1L4Q8WU68 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
U2AF1L4Q8WU68 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC23.95■■□□□ 1.42
U2AF1L4Q8WU68 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
U2AF1L4Q8WU68 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
U2AF1L4Q8WU68 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
U2AF1L4Q8WU68 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
U2AF1L4Q8WU68 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
U2AF1L4Q8WU68 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
U2AF1L4Q8WU68 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
U2AF1L4Q8WU68 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
U2AF1L4Q8WU68 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
U2AF1L4Q8WU68 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.94■■□□□ 1.42
U2AF1L4Q8WU68 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.94■■□□□ 1.42
U2AF1L4Q8WU68 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.94■■□□□ 1.42
U2AF1L4Q8WU68 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
U2AF1L4Q8WU68 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.94■■□□□ 1.42
U2AF1L4Q8WU68 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.94■■□□□ 1.42
U2AF1L4Q8WU68 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms