Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 KRT18P11-201ENST00000435214 1283 ntBASIC26.03■■□□□ 1.76
SSH3Q8TE77 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.03■■□□□ 1.76
SSH3Q8TE77 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC26.03■■□□□ 1.76
SSH3Q8TE77 AL024507.2-201ENST00000606070 2574 ntBASIC26.03■■□□□ 1.76
SSH3Q8TE77 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
SSH3Q8TE77 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
SSH3Q8TE77 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SSH3Q8TE77 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SSH3Q8TE77 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SSH3Q8TE77 PARN-205ENST00000539279 1557 ntTSL 2 BASIC26.03■■□□□ 1.76
SSH3Q8TE77 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC26.03■■□□□ 1.76
SSH3Q8TE77 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SSH3Q8TE77 MFSD11-216ENST00000590393 1141 ntBASIC26.02■■□□□ 1.76
SSH3Q8TE77 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SSH3Q8TE77 AC120498.10-201ENST00000621827 505 ntBASIC26.02■■□□□ 1.76
SSH3Q8TE77 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
SSH3Q8TE77 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC26.02■■□□□ 1.76
SSH3Q8TE77 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SSH3Q8TE77 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
SSH3Q8TE77 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SSH3Q8TE77 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SSH3Q8TE77 AC016769.1-201ENST00000409132 1010 ntBASIC26.01■■□□□ 1.75
SSH3Q8TE77 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
SSH3Q8TE77 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC26.01■■□□□ 1.75
SSH3Q8TE77 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SSH3Q8TE77 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SSH3Q8TE77 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
SSH3Q8TE77 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SSH3Q8TE77 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC26.01■■□□□ 1.75
SSH3Q8TE77 AC007375.3-201ENST00000600936 2314 ntBASIC26.01■■□□□ 1.75
SSH3Q8TE77 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.01■■□□□ 1.75
SSH3Q8TE77 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
SSH3Q8TE77 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC26■■□□□ 1.75
SSH3Q8TE77 PALM-207ENST00000590161 2137 ntTSL 4 BASIC26■■□□□ 1.75
SSH3Q8TE77 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC26■■□□□ 1.75
SSH3Q8TE77 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SSH3Q8TE77 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
SSH3Q8TE77 UQCRFS1P1-201ENST00000435169 820 ntBASIC26■■□□□ 1.75
SSH3Q8TE77 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC26■■□□□ 1.75
SSH3Q8TE77 RARRES2P11-201ENST00000635158 484 ntBASIC26■■□□□ 1.75
SSH3Q8TE77 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
SSH3Q8TE77 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC26■■□□□ 1.75
SSH3Q8TE77 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SSH3Q8TE77 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
SSH3Q8TE77 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SSH3Q8TE77 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC25.99■■□□□ 1.75
SSH3Q8TE77 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.99■■□□□ 1.75
SSH3Q8TE77 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SSH3Q8TE77 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
SSH3Q8TE77 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC25.99■■□□□ 1.75
SSH3Q8TE77 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
SSH3Q8TE77 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SSH3Q8TE77 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
SSH3Q8TE77 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
SSH3Q8TE77 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SSH3Q8TE77 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC25.99■■□□□ 1.75
SSH3Q8TE77 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SSH3Q8TE77 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SSH3Q8TE77 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC25.98■■□□□ 1.75
SSH3Q8TE77 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC25.98■■□□□ 1.75
SSH3Q8TE77 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC25.98■■□□□ 1.75
SSH3Q8TE77 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC25.98■■□□□ 1.75
SSH3Q8TE77 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SSH3Q8TE77 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC25.98■■□□□ 1.75
SSH3Q8TE77 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
SSH3Q8TE77 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
SSH3Q8TE77 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.98■■□□□ 1.75
SSH3Q8TE77 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC25.98■■□□□ 1.75
SSH3Q8TE77 AC092666.2-201ENST00000613287 246 ntBASIC25.98■■□□□ 1.75
SSH3Q8TE77 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC25.98■■□□□ 1.75
SSH3Q8TE77 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.98■■□□□ 1.75
SSH3Q8TE77 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SSH3Q8TE77 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SSH3Q8TE77 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
SSH3Q8TE77 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC25.97■■□□□ 1.75
SSH3Q8TE77 RBM17P2-201ENST00000616397 1405 ntBASIC25.97■■□□□ 1.75
SSH3Q8TE77 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
SSH3Q8TE77 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SSH3Q8TE77 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SSH3Q8TE77 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SSH3Q8TE77 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SSH3Q8TE77 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.97■■□□□ 1.75
SSH3Q8TE77 AL137784.2-201ENST00000607332 1000 ntBASIC25.97■■□□□ 1.75
SSH3Q8TE77 FGF8-207ENST00000618991 856 ntTSL 3 BASIC25.97■■□□□ 1.75
SSH3Q8TE77 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SSH3Q8TE77 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC25.97■■□□□ 1.75
SSH3Q8TE77 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SSH3Q8TE77 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
SSH3Q8TE77 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
SSH3Q8TE77 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.96■■□□□ 1.75
SSH3Q8TE77 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SSH3Q8TE77 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC25.96■■□□□ 1.75
SSH3Q8TE77 AC243732.1-201ENST00000612648 864 ntBASIC25.96■■□□□ 1.75
SSH3Q8TE77 AC011767.1-201ENST00000617410 1153 ntBASIC25.96■■□□□ 1.75
SSH3Q8TE77 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.75
SSH3Q8TE77 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SSH3Q8TE77 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.74
SSH3Q8TE77 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SSH3Q8TE77 DUX4L16-201ENST00000555130 1264 ntBASIC25.95■■□□□ 1.74
SSH3Q8TE77 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms