Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAF3IP1Q8TDR0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.81■■□□□ 1.08
TRAF3IP1Q8TDR0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAF3IP1Q8TDR0 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.81■■□□□ 1.08
TRAF3IP1Q8TDR0 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.81■■□□□ 1.08
TRAF3IP1Q8TDR0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.81■■□□□ 1.08
TRAF3IP1Q8TDR0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
TRAF3IP1Q8TDR0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAF3IP1Q8TDR0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.81■■□□□ 1.08
TRAF3IP1Q8TDR0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAF3IP1Q8TDR0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 IRS3P-201ENST00000223076 1006 ntBASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 MIR6084-201ENST00000622012 110 ntBASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.8■■□□□ 1.08
TRAF3IP1Q8TDR0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAF3IP1Q8TDR0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAF3IP1Q8TDR0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAF3IP1Q8TDR0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRAF3IP1Q8TDR0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAF3IP1Q8TDR0 MIR638-201ENST00000385237 100 ntBASIC21.79■■□□□ 1.08
TRAF3IP1Q8TDR0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAF3IP1Q8TDR0 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
TRAF3IP1Q8TDR0 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
TRAF3IP1Q8TDR0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TRAF3IP1Q8TDR0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAF3IP1Q8TDR0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAF3IP1Q8TDR0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.78■■□□□ 1.08
TRAF3IP1Q8TDR0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAF3IP1Q8TDR0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.78■■□□□ 1.08
TRAF3IP1Q8TDR0 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRAF3IP1Q8TDR0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.78■■□□□ 1.08
TRAF3IP1Q8TDR0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.78■■□□□ 1.08
TRAF3IP1Q8TDR0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.78■■□□□ 1.08
TRAF3IP1Q8TDR0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.78■■□□□ 1.08
TRAF3IP1Q8TDR0 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TRAF3IP1Q8TDR0 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
TRAF3IP1Q8TDR0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.77■■□□□ 1.08
TRAF3IP1Q8TDR0 AL049796.1-201ENST00000565336 1766 ntBASIC21.77■■□□□ 1.08
TRAF3IP1Q8TDR0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAF3IP1Q8TDR0 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAF3IP1Q8TDR0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAF3IP1Q8TDR0 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAF3IP1Q8TDR0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
TRAF3IP1Q8TDR0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
TRAF3IP1Q8TDR0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAF3IP1Q8TDR0 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAF3IP1Q8TDR0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.77■■□□□ 1.07
TRAF3IP1Q8TDR0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAF3IP1Q8TDR0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
TRAF3IP1Q8TDR0 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAF3IP1Q8TDR0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TRAF3IP1Q8TDR0 TPRG1LP1-201ENST00000598702 760 ntBASIC21.76■■□□□ 1.07
TRAF3IP1Q8TDR0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAF3IP1Q8TDR0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.76■■□□□ 1.07
TRAF3IP1Q8TDR0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.76■■□□□ 1.07
TRAF3IP1Q8TDR0 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRAF3IP1Q8TDR0 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.76■■□□□ 1.07
TRAF3IP1Q8TDR0 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAF3IP1Q8TDR0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.76■■□□□ 1.07
TRAF3IP1Q8TDR0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAF3IP1Q8TDR0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAF3IP1Q8TDR0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAF3IP1Q8TDR0 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRAF3IP1Q8TDR0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
TRAF3IP1Q8TDR0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRAF3IP1Q8TDR0 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.75■■□□□ 1.07
TRAF3IP1Q8TDR0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.75■■□□□ 1.07
TRAF3IP1Q8TDR0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TRAF3IP1Q8TDR0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.75■■□□□ 1.07
TRAF3IP1Q8TDR0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.75■■□□□ 1.07
TRAF3IP1Q8TDR0 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.75■■□□□ 1.07
TRAF3IP1Q8TDR0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAF3IP1Q8TDR0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAF3IP1Q8TDR0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TRAF3IP1Q8TDR0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAF3IP1Q8TDR0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.74■■□□□ 1.07
TRAF3IP1Q8TDR0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAF3IP1Q8TDR0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAF3IP1Q8TDR0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRAF3IP1Q8TDR0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAF3IP1Q8TDR0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms