Protein–RNA interactions for Protein: Q8N9Q2

SREK1IP1, Protein SREK1IP1, humanhuman

Predicted RBP Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1IP1Q8N9Q2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SREK1IP1Q8N9Q2 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SREK1IP1Q8N9Q2 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SREK1IP1Q8N9Q2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SREK1IP1Q8N9Q2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SREK1IP1Q8N9Q2 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 FEM1AP4-201ENST00000443167 1987 ntBASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 TNXA-203ENST00000507684 2038 ntBASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 AC021231.2-201ENST00000594613 730 ntBASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 AC244015.2-201ENST00000616358 1861 ntBASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SREK1IP1Q8N9Q2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SREK1IP1Q8N9Q2 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SREK1IP1Q8N9Q2 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
SREK1IP1Q8N9Q2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SREK1IP1Q8N9Q2 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
SREK1IP1Q8N9Q2 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SREK1IP1Q8N9Q2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SREK1IP1Q8N9Q2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.33■□□□□ 0.37
SREK1IP1Q8N9Q2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SREK1IP1Q8N9Q2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SREK1IP1Q8N9Q2 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SREK1IP1Q8N9Q2 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SREK1IP1Q8N9Q2 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.33■□□□□ 0.37
SREK1IP1Q8N9Q2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SREK1IP1Q8N9Q2 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.33■□□□□ 0.37
SREK1IP1Q8N9Q2 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SREK1IP1Q8N9Q2 OR6D1P-202ENST00000641007 5290 ntBASIC17.33■□□□□ 0.36
SREK1IP1Q8N9Q2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SREK1IP1Q8N9Q2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SREK1IP1Q8N9Q2 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms