Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD1Q8N668 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
COMMD1Q8N668 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD1Q8N668 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COMMD1Q8N668 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
COMMD1Q8N668 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.3■□□□□ 0.36
COMMD1Q8N668 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD1Q8N668 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COMMD1Q8N668 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
COMMD1Q8N668 ZNRF2P3-201ENST00000424200 374 ntBASIC17.3■□□□□ 0.36
COMMD1Q8N668 SLC47A1P1-202ENST00000449666 945 ntBASIC17.3■□□□□ 0.36
COMMD1Q8N668 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD1Q8N668 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
COMMD1Q8N668 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.3■□□□□ 0.36
COMMD1Q8N668 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD1Q8N668 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD1Q8N668 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD1Q8N668 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD1Q8N668 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD1Q8N668 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COMMD1Q8N668 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.3■□□□□ 0.36
COMMD1Q8N668 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD1Q8N668 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD1Q8N668 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD1Q8N668 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD1Q8N668 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD1Q8N668 AL353803.4-201ENST00000565882 1934 ntBASIC17.29■□□□□ 0.36
COMMD1Q8N668 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD1Q8N668 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COMMD1Q8N668 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD1Q8N668 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
COMMD1Q8N668 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD1Q8N668 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COMMD1Q8N668 IRS3P-201ENST00000223076 1006 ntBASIC17.29■□□□□ 0.36
COMMD1Q8N668 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.29■□□□□ 0.36
COMMD1Q8N668 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
COMMD1Q8N668 AC068587.7-201ENST00000641602 218 ntBASIC17.29■□□□□ 0.36
COMMD1Q8N668 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
COMMD1Q8N668 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD1Q8N668 FEM1AP1-201ENST00000431297 1995 ntBASIC17.29■□□□□ 0.36
COMMD1Q8N668 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
COMMD1Q8N668 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
COMMD1Q8N668 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD1Q8N668 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.29■□□□□ 0.36
COMMD1Q8N668 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
COMMD1Q8N668 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
COMMD1Q8N668 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
COMMD1Q8N668 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
COMMD1Q8N668 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COMMD1Q8N668 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COMMD1Q8N668 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.28■□□□□ 0.36
COMMD1Q8N668 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
COMMD1Q8N668 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COMMD1Q8N668 AP005435.1-201ENST00000529293 1178 ntBASIC17.28■□□□□ 0.36
COMMD1Q8N668 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.28■□□□□ 0.36
COMMD1Q8N668 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.28■□□□□ 0.36
COMMD1Q8N668 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC17.28■□□□□ 0.36
COMMD1Q8N668 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COMMD1Q8N668 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
COMMD1Q8N668 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
COMMD1Q8N668 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
COMMD1Q8N668 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC17.28■□□□□ 0.36
COMMD1Q8N668 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
COMMD1Q8N668 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
COMMD1Q8N668 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
COMMD1Q8N668 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COMMD1Q8N668 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.27■□□□□ 0.36
COMMD1Q8N668 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COMMD1Q8N668 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
COMMD1Q8N668 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.27■□□□□ 0.36
COMMD1Q8N668 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COMMD1Q8N668 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.27■□□□□ 0.36
COMMD1Q8N668 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
COMMD1Q8N668 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.27■□□□□ 0.36
COMMD1Q8N668 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COMMD1Q8N668 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
COMMD1Q8N668 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COMMD1Q8N668 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
COMMD1Q8N668 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.27■□□□□ 0.36
COMMD1Q8N668 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.27■□□□□ 0.36
COMMD1Q8N668 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.27■□□□□ 0.36
COMMD1Q8N668 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.27■□□□□ 0.36
COMMD1Q8N668 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
COMMD1Q8N668 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
COMMD1Q8N668 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
COMMD1Q8N668 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.27■□□□□ 0.35
COMMD1Q8N668 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COMMD1Q8N668 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
COMMD1Q8N668 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COMMD1Q8N668 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
COMMD1Q8N668 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.26■□□□□ 0.35
COMMD1Q8N668 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COMMD1Q8N668 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
COMMD1Q8N668 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COMMD1Q8N668 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
COMMD1Q8N668 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.26■□□□□ 0.35
COMMD1Q8N668 IGHV3-19-201ENST00000521488 291 ntBASIC17.26■□□□□ 0.35
COMMD1Q8N668 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.26■□□□□ 0.35
COMMD1Q8N668 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
COMMD1Q8N668 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms