Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.91■■□□□ 1.1
SCML4Q8N228 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.91■■□□□ 1.1
SCML4Q8N228 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.9■■□□□ 1.1
SCML4Q8N228 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCML4Q8N228 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SCML4Q8N228 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.9■■□□□ 1.1
SCML4Q8N228 Z98882.1-201ENST00000622160 2253 ntBASIC21.9■■□□□ 1.1
SCML4Q8N228 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.9■■□□□ 1.1
SCML4Q8N228 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.9■■□□□ 1.1
SCML4Q8N228 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SCML4Q8N228 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.9■■□□□ 1.1
SCML4Q8N228 AC013268.1-206ENST00000638368 961 ntBASIC21.9■■□□□ 1.1
SCML4Q8N228 AC112229.1-201ENST00000639295 961 ntBASIC21.9■■□□□ 1.1
SCML4Q8N228 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCML4Q8N228 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.9■■□□□ 1.1
SCML4Q8N228 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SCML4Q8N228 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SCML4Q8N228 LINC00565-201ENST00000562710 2331 ntBASIC21.89■■□□□ 1.1
SCML4Q8N228 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCML4Q8N228 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.89■■□□□ 1.09
SCML4Q8N228 CNN2P6-201ENST00000439038 900 ntBASIC21.89■■□□□ 1.09
SCML4Q8N228 AC245052.3-201ENST00000450182 901 ntBASIC21.89■■□□□ 1.09
SCML4Q8N228 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.89■■□□□ 1.09
SCML4Q8N228 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.89■■□□□ 1.09
SCML4Q8N228 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
SCML4Q8N228 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SCML4Q8N228 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.09
SCML4Q8N228 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCML4Q8N228 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCML4Q8N228 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCML4Q8N228 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.89■■□□□ 1.09
SCML4Q8N228 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCML4Q8N228 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SCML4Q8N228 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
SCML4Q8N228 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML4Q8N228 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML4Q8N228 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.88■■□□□ 1.09
SCML4Q8N228 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML4Q8N228 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SCML4Q8N228 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML4Q8N228 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.88■■□□□ 1.09
SCML4Q8N228 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.88■■□□□ 1.09
SCML4Q8N228 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SCML4Q8N228 AL162412.1-201ENST00000567129 965 ntBASIC21.88■■□□□ 1.09
SCML4Q8N228 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC21.88■■□□□ 1.09
SCML4Q8N228 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML4Q8N228 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML4Q8N228 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML4Q8N228 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML4Q8N228 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
SCML4Q8N228 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SCML4Q8N228 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.88■■□□□ 1.09
SCML4Q8N228 CLDN5-201ENST00000403084 2357 ntBASIC21.87■■□□□ 1.09
SCML4Q8N228 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.87■■□□□ 1.09
SCML4Q8N228 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.87■■□□□ 1.09
SCML4Q8N228 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCML4Q8N228 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.87■■□□□ 1.09
SCML4Q8N228 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCML4Q8N228 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCML4Q8N228 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SCML4Q8N228 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SCML4Q8N228 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCML4Q8N228 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCML4Q8N228 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCML4Q8N228 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
SCML4Q8N228 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.86■■□□□ 1.09
SCML4Q8N228 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.86■■□□□ 1.09
SCML4Q8N228 AC026185.1-201ENST00000445748 174 ntBASIC21.86■■□□□ 1.09
SCML4Q8N228 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.86■■□□□ 1.09
SCML4Q8N228 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SCML4Q8N228 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCML4Q8N228 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
SCML4Q8N228 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SCML4Q8N228 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SCML4Q8N228 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.86■■□□□ 1.09
SCML4Q8N228 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
SCML4Q8N228 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCML4Q8N228 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCML4Q8N228 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCML4Q8N228 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
SCML4Q8N228 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.85■■□□□ 1.09
SCML4Q8N228 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.85■■□□□ 1.09
SCML4Q8N228 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.85■■□□□ 1.09
SCML4Q8N228 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCML4Q8N228 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.85■■□□□ 1.09
SCML4Q8N228 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.85■■□□□ 1.09
SCML4Q8N228 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SCML4Q8N228 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SCML4Q8N228 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
SCML4Q8N228 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SCML4Q8N228 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.84■■□□□ 1.09
SCML4Q8N228 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCML4Q8N228 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
SCML4Q8N228 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SCML4Q8N228 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SCML4Q8N228 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
SCML4Q8N228 AC091799.1-201ENST00000422823 811 ntBASIC21.84■■□□□ 1.09
SCML4Q8N228 AC007322.1-201ENST00000426983 750 ntBASIC21.84■■□□□ 1.09
SCML4Q8N228 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.84■■□□□ 1.09
SCML4Q8N228 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms