Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.91■□□□□ 0.94
TMEFF1Q8IYR6 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TMEFF1Q8IYR6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.91■□□□□ 0.94
TMEFF1Q8IYR6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TMEFF1Q8IYR6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
TMEFF1Q8IYR6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
TMEFF1Q8IYR6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TMEFF1Q8IYR6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEFF1Q8IYR6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEFF1Q8IYR6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
TMEFF1Q8IYR6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.9■□□□□ 0.94
TMEFF1Q8IYR6 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEFF1Q8IYR6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEFF1Q8IYR6 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.9■□□□□ 0.94
TMEFF1Q8IYR6 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
TMEFF1Q8IYR6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.9■□□□□ 0.94
TMEFF1Q8IYR6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
TMEFF1Q8IYR6 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
TMEFF1Q8IYR6 KRT17P1-201ENST00000399211 1546 ntBASIC20.89■□□□□ 0.94
TMEFF1Q8IYR6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
TMEFF1Q8IYR6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEFF1Q8IYR6 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEFF1Q8IYR6 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.89■□□□□ 0.93
TMEFF1Q8IYR6 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEFF1Q8IYR6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
TMEFF1Q8IYR6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.89■□□□□ 0.93
TMEFF1Q8IYR6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.89■□□□□ 0.93
TMEFF1Q8IYR6 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.89■□□□□ 0.93
TMEFF1Q8IYR6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TMEFF1Q8IYR6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TMEFF1Q8IYR6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.88■□□□□ 0.93
TMEFF1Q8IYR6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEFF1Q8IYR6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TMEFF1Q8IYR6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEFF1Q8IYR6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TMEFF1Q8IYR6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEFF1Q8IYR6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
TMEFF1Q8IYR6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.88■□□□□ 0.93
TMEFF1Q8IYR6 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEFF1Q8IYR6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
TMEFF1Q8IYR6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEFF1Q8IYR6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TMEFF1Q8IYR6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
TMEFF1Q8IYR6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.88■□□□□ 0.93
TMEFF1Q8IYR6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TMEFF1Q8IYR6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
TMEFF1Q8IYR6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEFF1Q8IYR6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TMEFF1Q8IYR6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMEFF1Q8IYR6 AC003102.1-202ENST00000563394 1796 ntBASIC20.85■□□□□ 0.93
TMEFF1Q8IYR6 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMEFF1Q8IYR6 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMEFF1Q8IYR6 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
TMEFF1Q8IYR6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC20.85■□□□□ 0.93
TMEFF1Q8IYR6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEFF1Q8IYR6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.85■□□□□ 0.93
TMEFF1Q8IYR6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.85■□□□□ 0.93
TMEFF1Q8IYR6 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMEFF1Q8IYR6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.85■□□□□ 0.93
TMEFF1Q8IYR6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.85■□□□□ 0.93
TMEFF1Q8IYR6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMEFF1Q8IYR6 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEFF1Q8IYR6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMEFF1Q8IYR6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TMEFF1Q8IYR6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TMEFF1Q8IYR6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms