Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC28Q86X40 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC28Q86X40 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC28Q86X40 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC28Q86X40 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC28Q86X40 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.58■□□□□ 0.56
LRRC28Q86X40 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.58■□□□□ 0.56
LRRC28Q86X40 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC28Q86X40 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LRRC28Q86X40 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
LRRC28Q86X40 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRC28Q86X40 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRC28Q86X40 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
LRRC28Q86X40 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.57■□□□□ 0.56
LRRC28Q86X40 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.57■□□□□ 0.56
LRRC28Q86X40 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC28Q86X40 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.57■□□□□ 0.56
LRRC28Q86X40 AC099791.1-201ENST00000416440 715 ntBASIC18.57■□□□□ 0.56
LRRC28Q86X40 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRC28Q86X40 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.57■□□□□ 0.56
LRRC28Q86X40 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC28Q86X40 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC28Q86X40 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC28Q86X40 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LRRC28Q86X40 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
LRRC28Q86X40 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
LRRC28Q86X40 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC28Q86X40 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC28Q86X40 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LRRC28Q86X40 AC004687.1-201ENST00000579003 1625 ntBASIC18.56■□□□□ 0.56
LRRC28Q86X40 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.56■□□□□ 0.56
LRRC28Q86X40 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LRRC28Q86X40 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC28Q86X40 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
LRRC28Q86X40 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC28Q86X40 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC28Q86X40 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC28Q86X40 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LRRC28Q86X40 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC28Q86X40 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
LRRC28Q86X40 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC28Q86X40 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC28Q86X40 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.56■□□□□ 0.56
LRRC28Q86X40 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC28Q86X40 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LRRC28Q86X40 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC28Q86X40 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
LRRC28Q86X40 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC28Q86X40 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC28Q86X40 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
LRRC28Q86X40 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC28Q86X40 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.56■□□□□ 0.56
LRRC28Q86X40 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC28Q86X40 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
LRRC28Q86X40 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRC28Q86X40 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC28Q86X40 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC28Q86X40 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC28Q86X40 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.55■□□□□ 0.56
LRRC28Q86X40 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC28Q86X40 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC28Q86X40 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC28Q86X40 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC28Q86X40 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC28Q86X40 GABARAPL3-202ENST00000624044 1851 ntBASIC18.55■□□□□ 0.56
LRRC28Q86X40 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC28Q86X40 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRC28Q86X40 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC28Q86X40 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC28Q86X40 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
LRRC28Q86X40 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LRRC28Q86X40 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRC28Q86X40 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC28Q86X40 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC28Q86X40 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC28Q86X40 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC28Q86X40 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC28Q86X40 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
LRRC28Q86X40 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LRRC28Q86X40 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC28Q86X40 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC28Q86X40 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRC28Q86X40 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC28Q86X40 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC28Q86X40 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC28Q86X40 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC28Q86X40 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LRRC28Q86X40 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC28Q86X40 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LRRC28Q86X40 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC28Q86X40 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.54■□□□□ 0.56
LRRC28Q86X40 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LRRC28Q86X40 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC28Q86X40 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LRRC28Q86X40 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC28Q86X40 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC28Q86X40 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC28Q86X40 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC28Q86X40 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC28Q86X40 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms