Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.26■■□□□ 1.79
UBE3BQ7Z3V4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC26.26■■□□□ 1.79
UBE3BQ7Z3V4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
UBE3BQ7Z3V4 MARS-234ENST00000630571 216 ntTSL 5 BASIC26.26■■□□□ 1.79
UBE3BQ7Z3V4 MARS-235ENST00000630803 183 ntTSL 3 BASIC26.26■■□□□ 1.79
UBE3BQ7Z3V4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.25■■□□□ 1.79
UBE3BQ7Z3V4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.25■■□□□ 1.79
UBE3BQ7Z3V4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
UBE3BQ7Z3V4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC26.25■■□□□ 1.79
UBE3BQ7Z3V4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
UBE3BQ7Z3V4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
UBE3BQ7Z3V4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
UBE3BQ7Z3V4 AL591742.1-201ENST00000604433 565 ntBASIC26.25■■□□□ 1.79
UBE3BQ7Z3V4 OR10C1-204ENST00000622521 1039 ntBASIC26.25■■□□□ 1.79
UBE3BQ7Z3V4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC26.25■■□□□ 1.79
UBE3BQ7Z3V4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
UBE3BQ7Z3V4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
UBE3BQ7Z3V4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
UBE3BQ7Z3V4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC26.24■■□□□ 1.79
UBE3BQ7Z3V4 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
UBE3BQ7Z3V4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC26.24■■□□□ 1.79
UBE3BQ7Z3V4 AC069236.1-201ENST00000604339 616 ntBASIC26.24■■□□□ 1.79
UBE3BQ7Z3V4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
UBE3BQ7Z3V4 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
UBE3BQ7Z3V4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
UBE3BQ7Z3V4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
UBE3BQ7Z3V4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBE3BQ7Z3V4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBE3BQ7Z3V4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBE3BQ7Z3V4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC26.23■■□□□ 1.79
UBE3BQ7Z3V4 AC008694.1-202ENST00000636953 945 ntBASIC26.23■■□□□ 1.79
UBE3BQ7Z3V4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
UBE3BQ7Z3V4 MKRN4P-201ENST00000444706 1521 ntBASIC26.23■■□□□ 1.79
UBE3BQ7Z3V4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.23■■□□□ 1.79
UBE3BQ7Z3V4 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
UBE3BQ7Z3V4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
UBE3BQ7Z3V4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
UBE3BQ7Z3V4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBE3BQ7Z3V4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBE3BQ7Z3V4 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBE3BQ7Z3V4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC26.22■■□□□ 1.79
UBE3BQ7Z3V4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC26.22■■□□□ 1.79
UBE3BQ7Z3V4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
UBE3BQ7Z3V4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
UBE3BQ7Z3V4 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
UBE3BQ7Z3V4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
UBE3BQ7Z3V4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
UBE3BQ7Z3V4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
UBE3BQ7Z3V4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
UBE3BQ7Z3V4 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
UBE3BQ7Z3V4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
UBE3BQ7Z3V4 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
UBE3BQ7Z3V4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
UBE3BQ7Z3V4 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.21■■□□□ 1.79
UBE3BQ7Z3V4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.21■■□□□ 1.79
UBE3BQ7Z3V4 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
UBE3BQ7Z3V4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.21■■□□□ 1.79
UBE3BQ7Z3V4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
UBE3BQ7Z3V4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
UBE3BQ7Z3V4 GOLGA2P6-201ENST00000340929 2049 ntBASIC26.21■■□□□ 1.79
UBE3BQ7Z3V4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
UBE3BQ7Z3V4 AL117328.2-201ENST00000624617 1940 ntBASIC26.2■■□□□ 1.79
UBE3BQ7Z3V4 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
UBE3BQ7Z3V4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC26.2■■□□□ 1.79
UBE3BQ7Z3V4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
UBE3BQ7Z3V4 AC091799.1-201ENST00000422823 811 ntBASIC26.2■■□□□ 1.78
UBE3BQ7Z3V4 AC245052.3-201ENST00000450182 901 ntBASIC26.2■■□□□ 1.78
UBE3BQ7Z3V4 AL162412.1-201ENST00000567129 965 ntBASIC26.2■■□□□ 1.78
UBE3BQ7Z3V4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC26.2■■□□□ 1.78
UBE3BQ7Z3V4 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC26.2■■□□□ 1.78
UBE3BQ7Z3V4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
UBE3BQ7Z3V4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
UBE3BQ7Z3V4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
UBE3BQ7Z3V4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
UBE3BQ7Z3V4 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 AC069152.1-201ENST00000438030 544 ntBASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC26.19■■□□□ 1.78
UBE3BQ7Z3V4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.18■■□□□ 1.78
UBE3BQ7Z3V4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
UBE3BQ7Z3V4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
UBE3BQ7Z3V4 MIPEPP3-201ENST00000412105 444 ntBASIC26.18■■□□□ 1.78
UBE3BQ7Z3V4 AL512625.2-201ENST00000417533 625 ntBASIC26.18■■□□□ 1.78
UBE3BQ7Z3V4 RARRES2P4-201ENST00000514074 484 ntBASIC26.18■■□□□ 1.78
UBE3BQ7Z3V4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC26.18■■□□□ 1.78
UBE3BQ7Z3V4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms