Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
C11orf88Q6PI97 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
C11orf88Q6PI97 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
C11orf88Q6PI97 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
C11orf88Q6PI97 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
C11orf88Q6PI97 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
C11orf88Q6PI97 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
C11orf88Q6PI97 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
C11orf88Q6PI97 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
C11orf88Q6PI97 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
C11orf88Q6PI97 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
C11orf88Q6PI97 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
C11orf88Q6PI97 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
C11orf88Q6PI97 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.12■□□□□ 0.49
C11orf88Q6PI97 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
C11orf88Q6PI97 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.12■□□□□ 0.49
C11orf88Q6PI97 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
C11orf88Q6PI97 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
C11orf88Q6PI97 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
C11orf88Q6PI97 LINC01529-204ENST00000636474 1715 ntBASIC18.12■□□□□ 0.49
C11orf88Q6PI97 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
C11orf88Q6PI97 LINC01960-201ENST00000563759 1884 ntBASIC18.12■□□□□ 0.49
C11orf88Q6PI97 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
C11orf88Q6PI97 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 FP325331.1-202ENST00000623531 1380 ntBASIC18.1■□□□□ 0.49
C11orf88Q6PI97 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 PBX2P1-201ENST00000493219 1291 ntBASIC18.1■□□□□ 0.49
C11orf88Q6PI97 AC009086.3-201ENST00000623486 1008 ntBASIC18.1■□□□□ 0.49
C11orf88Q6PI97 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.1■□□□□ 0.49
C11orf88Q6PI97 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.09■□□□□ 0.49
C11orf88Q6PI97 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms