Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
SLC3A1Q07837 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
SLC3A1Q07837 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC3A1Q07837 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC3A1Q07837 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.76■□□□□ 0.59
SLC3A1Q07837 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SLC3A1Q07837 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC3A1Q07837 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC3A1Q07837 FEM1AP1-201ENST00000431297 1995 ntBASIC18.76■□□□□ 0.59
SLC3A1Q07837 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC3A1Q07837 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC3A1Q07837 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC3A1Q07837 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC3A1Q07837 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC3A1Q07837 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC3A1Q07837 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC3A1Q07837 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC3A1Q07837 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SLC3A1Q07837 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC3A1Q07837 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC3A1Q07837 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC3A1Q07837 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC3A1Q07837 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC3A1Q07837 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC3A1Q07837 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC3A1Q07837 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SLC3A1Q07837 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC3A1Q07837 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC3A1Q07837 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC3A1Q07837 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC3A1Q07837 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC3A1Q07837 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
SLC3A1Q07837 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC3A1Q07837 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC3A1Q07837 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.75■□□□□ 0.59
SLC3A1Q07837 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.75■□□□□ 0.59
SLC3A1Q07837 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC3A1Q07837 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SLC3A1Q07837 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC3A1Q07837 AF213884.3-201ENST00000563833 479 ntBASIC18.75■□□□□ 0.59
SLC3A1Q07837 AL031432.3-201ENST00000607698 485 ntBASIC18.75■□□□□ 0.59
SLC3A1Q07837 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC3A1Q07837 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC3A1Q07837 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SLC3A1Q07837 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC3A1Q07837 AL049796.1-201ENST00000565336 1766 ntBASIC18.75■□□□□ 0.59
SLC3A1Q07837 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC3A1Q07837 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC3A1Q07837 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC3A1Q07837 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.74■□□□□ 0.59
SLC3A1Q07837 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC3A1Q07837 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SLC3A1Q07837 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SLC3A1Q07837 RASA4CP-201ENST00000424092 1398 ntBASIC18.74■□□□□ 0.59
SLC3A1Q07837 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC3A1Q07837 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC3A1Q07837 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC3A1Q07837 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC3A1Q07837 MIR939-201ENST00000401314 82 ntBASIC18.74■□□□□ 0.59
SLC3A1Q07837 BX842568.3-201ENST00000418104 571 ntBASIC18.74■□□□□ 0.59
SLC3A1Q07837 AP001330.3-201ENST00000520123 633 ntBASIC18.74■□□□□ 0.59
SLC3A1Q07837 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC3A1Q07837 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC3A1Q07837 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SLC3A1Q07837 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC3A1Q07837 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.74■□□□□ 0.59
SLC3A1Q07837 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SLC3A1Q07837 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC3A1Q07837 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC3A1Q07837 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC3A1Q07837 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC3A1Q07837 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC3A1Q07837 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC3A1Q07837 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SLC3A1Q07837 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC3A1Q07837 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.73■□□□□ 0.59
SLC3A1Q07837 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC3A1Q07837 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC3A1Q07837 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC3A1Q07837 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.73■□□□□ 0.59
SLC3A1Q07837 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.73■□□□□ 0.59
SLC3A1Q07837 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SLC3A1Q07837 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SLC3A1Q07837 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC3A1Q07837 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC3A1Q07837 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SLC3A1Q07837 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC3A1Q07837 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SLC3A1Q07837 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.72■□□□□ 0.59
SLC3A1Q07837 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SLC3A1Q07837 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC3A1Q07837 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC3A1Q07837 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SLC3A1Q07837 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC3A1Q07837 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC18.72■□□□□ 0.59
SLC3A1Q07837 AC233992.3-201ENST00000607491 485 ntBASIC18.72■□□□□ 0.59
SLC3A1Q07837 AL136967.2-201ENST00000623968 743 ntBASIC18.72■□□□□ 0.59
SLC3A1Q07837 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
SLC3A1Q07837 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
SLC3A1Q07837 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms