Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM3P62310 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM3P62310 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM3P62310 AC027702.1-201ENST00000563810 1770 ntBASIC18.87■□□□□ 0.61
LSM3P62310 AC098818.2-201ENST00000564925 2320 ntBASIC18.87■□□□□ 0.61
LSM3P62310 PALM-207ENST00000590161 2137 ntTSL 4 BASIC18.87■□□□□ 0.61
LSM3P62310 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM3P62310 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LSM3P62310 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LSM3P62310 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM3P62310 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.86■□□□□ 0.61
LSM3P62310 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM3P62310 PLK5-205ENST00000642079 1969 ntBASIC18.86■□□□□ 0.61
LSM3P62310 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM3P62310 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
LSM3P62310 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM3P62310 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM3P62310 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.86■□□□□ 0.61
LSM3P62310 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LSM3P62310 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM3P62310 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM3P62310 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LSM3P62310 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.86■□□□□ 0.61
LSM3P62310 MIR639-201ENST00000384974 98 ntBASIC18.86■□□□□ 0.61
LSM3P62310 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.86■□□□□ 0.61
LSM3P62310 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LSM3P62310 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.86■□□□□ 0.61
LSM3P62310 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
LSM3P62310 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM3P62310 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM3P62310 SMG8-203ENST00000578922 2178 ntBASIC18.86■□□□□ 0.61
LSM3P62310 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.86■□□□□ 0.61
LSM3P62310 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM3P62310 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
LSM3P62310 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM3P62310 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM3P62310 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM3P62310 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LSM3P62310 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
LSM3P62310 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.85■□□□□ 0.61
LSM3P62310 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM3P62310 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.85■□□□□ 0.61
LSM3P62310 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM3P62310 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM3P62310 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM3P62310 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM3P62310 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
LSM3P62310 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.85■□□□□ 0.61
LSM3P62310 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM3P62310 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
LSM3P62310 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LSM3P62310 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM3P62310 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM3P62310 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LSM3P62310 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LSM3P62310 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LSM3P62310 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.84■□□□□ 0.61
LSM3P62310 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LSM3P62310 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LSM3P62310 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM3P62310 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.84■□□□□ 0.61
LSM3P62310 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM3P62310 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM3P62310 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM3P62310 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LSM3P62310 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM3P62310 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.84■□□□□ 0.61
LSM3P62310 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.84■□□□□ 0.61
LSM3P62310 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.84■□□□□ 0.61
LSM3P62310 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LSM3P62310 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM3P62310 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM3P62310 THA1P-201ENST00000590384 1145 ntBASIC18.84■□□□□ 0.61
LSM3P62310 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LSM3P62310 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM3P62310 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM3P62310 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.84■□□□□ 0.61
LSM3P62310 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM3P62310 AC018445.3-201ENST00000624177 1945 ntBASIC18.84■□□□□ 0.61
LSM3P62310 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.84■□□□□ 0.61
LSM3P62310 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM3P62310 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM3P62310 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LSM3P62310 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LSM3P62310 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.83■□□□□ 0.61
LSM3P62310 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM3P62310 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM3P62310 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
LSM3P62310 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM3P62310 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM3P62310 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM3P62310 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM3P62310 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM3P62310 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LSM3P62310 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
LSM3P62310 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
LSM3P62310 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSM3P62310 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.83■□□□□ 0.6
LSM3P62310 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LSM3P62310 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms