Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.95■■□□□ 1.1
SLC1A1P43005 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SLC1A1P43005 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC1A1P43005 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.95■■□□□ 1.1
SLC1A1P43005 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SLC1A1P43005 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SLC1A1P43005 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
SLC1A1P43005 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC1A1P43005 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SLC1A1P43005 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.94■■□□□ 1.1
SLC1A1P43005 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SLC1A1P43005 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SLC1A1P43005 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SLC1A1P43005 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC1A1P43005 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC1A1P43005 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SLC1A1P43005 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC1A1P43005 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SLC1A1P43005 SUDS3P1-201ENST00000505831 966 ntBASIC21.94■■□□□ 1.1
SLC1A1P43005 EEF1DP3-203ENST00000566025 782 ntBASIC21.94■■□□□ 1.1
SLC1A1P43005 AC053503.5-201ENST00000601508 636 ntBASIC21.94■■□□□ 1.1
SLC1A1P43005 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SLC1A1P43005 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SLC1A1P43005 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.94■■□□□ 1.1
SLC1A1P43005 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
SLC1A1P43005 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SLC1A1P43005 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC1A1P43005 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC1A1P43005 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC1A1P43005 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC1A1P43005 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC1A1P43005 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
SLC1A1P43005 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC1A1P43005 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.93■■□□□ 1.1
SLC1A1P43005 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC21.93■■□□□ 1.1
SLC1A1P43005 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.93■■□□□ 1.1
SLC1A1P43005 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
SLC1A1P43005 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.93■■□□□ 1.1
SLC1A1P43005 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.93■■□□□ 1.1
SLC1A1P43005 AL354811.1-201ENST00000610286 706 ntBASIC21.93■■□□□ 1.1
SLC1A1P43005 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
SLC1A1P43005 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.93■■□□□ 1.1
SLC1A1P43005 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SLC1A1P43005 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.92■■□□□ 1.1
SLC1A1P43005 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC1A1P43005 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.92■■□□□ 1.1
SLC1A1P43005 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC1A1P43005 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.92■■□□□ 1.1
SLC1A1P43005 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC1A1P43005 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC1A1P43005 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.92■■□□□ 1.1
SLC1A1P43005 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SLC1A1P43005 PLK5-205ENST00000642079 1969 ntBASIC21.92■■□□□ 1.1
SLC1A1P43005 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SLC1A1P43005 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.92■■□□□ 1.1
SLC1A1P43005 AL157384.1-201ENST00000445995 2473 ntBASIC21.91■■□□□ 1.1
SLC1A1P43005 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC1A1P43005 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC1A1P43005 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.91■■□□□ 1.1
SLC1A1P43005 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC1A1P43005 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC1A1P43005 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC1A1P43005 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.91■■□□□ 1.1
SLC1A1P43005 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC1A1P43005 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC1A1P43005 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC1A1P43005 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.91■■□□□ 1.1
SLC1A1P43005 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.91■■□□□ 1.1
SLC1A1P43005 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC1A1P43005 AL139246.5-201ENST00000606645 996 ntBASIC21.91■■□□□ 1.1
SLC1A1P43005 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.91■■□□□ 1.1
SLC1A1P43005 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC1A1P43005 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC1A1P43005 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC1A1P43005 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.91■■□□□ 1.1
SLC1A1P43005 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC1A1P43005 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
SLC1A1P43005 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SLC1A1P43005 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SLC1A1P43005 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.9■■□□□ 1.1
SLC1A1P43005 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.9■■□□□ 1.1
SLC1A1P43005 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SLC1A1P43005 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC1A1P43005 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
SLC1A1P43005 FEM1AP1-201ENST00000431297 1995 ntBASIC21.9■■□□□ 1.1
SLC1A1P43005 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC1A1P43005 AC121338.2-201ENST00000622535 1744 ntBASIC21.9■■□□□ 1.1
SLC1A1P43005 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.9■■□□□ 1.1
SLC1A1P43005 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.9■■□□□ 1.1
SLC1A1P43005 TPRG1LP1-201ENST00000598702 760 ntBASIC21.9■■□□□ 1.1
SLC1A1P43005 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.9■■□□□ 1.1
SLC1A1P43005 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SLC1A1P43005 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC1A1P43005 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SLC1A1P43005 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.89■■□□□ 1.1
SLC1A1P43005 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SLC1A1P43005 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SLC1A1P43005 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.89■■□□□ 1.1
SLC1A1P43005 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SLC1A1P43005 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.89■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms