Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
CLCN1P35523 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN1P35523 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN1P35523 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN1P35523 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.77■■□□□ 1.4
CLCN1P35523 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN1P35523 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN1P35523 AC073314.1-201ENST00000568729 2216 ntBASIC23.77■■□□□ 1.4
CLCN1P35523 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.77■■□□□ 1.4
CLCN1P35523 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN1P35523 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN1P35523 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CLCN1P35523 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLCN1P35523 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLCN1P35523 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CLCN1P35523 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLCN1P35523 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC23.76■■□□□ 1.39
CLCN1P35523 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLCN1P35523 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLCN1P35523 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.76■■□□□ 1.39
CLCN1P35523 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.76■■□□□ 1.39
CLCN1P35523 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
CLCN1P35523 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN1P35523 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN1P35523 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC23.75■■□□□ 1.39
CLCN1P35523 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.75■■□□□ 1.39
CLCN1P35523 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN1P35523 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CLCN1P35523 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN1P35523 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.75■■□□□ 1.39
CLCN1P35523 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN1P35523 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CLCN1P35523 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
CLCN1P35523 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN1P35523 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLCN1P35523 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.75■■□□□ 1.39
CLCN1P35523 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN1P35523 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.74■■□□□ 1.39
CLCN1P35523 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN1P35523 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CLCN1P35523 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN1P35523 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.74■■□□□ 1.39
CLCN1P35523 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.74■■□□□ 1.39
CLCN1P35523 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN1P35523 AL117332.1-201ENST00000622628 974 ntBASIC23.74■■□□□ 1.39
CLCN1P35523 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
CLCN1P35523 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN1P35523 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN1P35523 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN1P35523 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLCN1P35523 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CLCN1P35523 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN1P35523 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN1P35523 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN1P35523 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN1P35523 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN1P35523 TNXA-203ENST00000507684 2038 ntBASIC23.73■■□□□ 1.39
CLCN1P35523 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN1P35523 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN1P35523 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN1P35523 MIR3621-201ENST00000580529 85 ntBASIC23.73■■□□□ 1.39
CLCN1P35523 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.73■■□□□ 1.39
CLCN1P35523 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN1P35523 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN1P35523 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN1P35523 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN1P35523 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN1P35523 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
CLCN1P35523 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLCN1P35523 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.73■■□□□ 1.39
CLCN1P35523 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.72■■□□□ 1.39
CLCN1P35523 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLCN1P35523 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.72■■□□□ 1.39
CLCN1P35523 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.72■■□□□ 1.39
CLCN1P35523 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.72■■□□□ 1.39
CLCN1P35523 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
CLCN1P35523 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLCN1P35523 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLCN1P35523 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC23.72■■□□□ 1.39
CLCN1P35523 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC23.72■■□□□ 1.39
CLCN1P35523 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CLCN1P35523 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CLCN1P35523 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC23.71■■□□□ 1.39
CLCN1P35523 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CLCN1P35523 ME2-216ENST00000639850 2331 ntTSL 5 BASIC23.71■■□□□ 1.39
CLCN1P35523 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLCN1P35523 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLCN1P35523 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.71■■□□□ 1.39
CLCN1P35523 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.71■■□□□ 1.39
CLCN1P35523 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLCN1P35523 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.71■■□□□ 1.39
CLCN1P35523 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC23.71■■□□□ 1.39
CLCN1P35523 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
CLCN1P35523 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLCN1P35523 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
CLCN1P35523 AC004408.2-201ENST00000623613 2777 ntBASIC23.71■■□□□ 1.39
CLCN1P35523 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.71■■□□□ 1.39
CLCN1P35523 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CLCN1P35523 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.71■■□□□ 1.39
CLCN1P35523 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms