Protein–RNA interactions for Protein: P20929

NEB, Nebulin, humanhuman

Predictions only

Length 6,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEBP20929 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC8.11□□□□□ -1.11
NEBP20929 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
NEBP20929 AC091390.4-202ENST00000476426 537 ntBASIC8.11□□□□□ -1.11
NEBP20929 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC8.11□□□□□ -1.11
NEBP20929 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC8.11□□□□□ -1.11
NEBP20929 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC8.11□□□□□ -1.11
NEBP20929 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 PMS2P2-201ENST00000425039 1128 ntBASIC8.11□□□□□ -1.11
NEBP20929 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC8.11□□□□□ -1.11
NEBP20929 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 USF2-207ENST00000595068 1612 ntTSL 5 BASIC8.11□□□□□ -1.11
NEBP20929 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
NEBP20929 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC8.11□□□□□ -1.11
NEBP20929 VENTXP5-201ENST00000523979 775 ntBASIC8.11□□□□□ -1.11
NEBP20929 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
NEBP20929 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
NEBP20929 AF228730.7-201ENST00000641842 219 ntBASIC8.11□□□□□ -1.11
NEBP20929 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NEBP20929 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC8.1□□□□□ -1.11
NEBP20929 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC8.1□□□□□ -1.11
NEBP20929 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
NEBP20929 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NEBP20929 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC8.1□□□□□ -1.11
NEBP20929 BX842568.4-201ENST00000421222 227 ntBASIC8.1□□□□□ -1.11
NEBP20929 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC8.1□□□□□ -1.11
NEBP20929 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NEBP20929 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC8.1□□□□□ -1.11
NEBP20929 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC8.1□□□□□ -1.11
NEBP20929 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC8.1□□□□□ -1.11
NEBP20929 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NEBP20929 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC8.1□□□□□ -1.11
NEBP20929 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC8.1□□□□□ -1.11
NEBP20929 AC138907.5-202ENST00000569484 235 ntBASIC8.1□□□□□ -1.11
NEBP20929 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC8.1□□□□□ -1.11
NEBP20929 AC112497.1-201ENST00000624824 639 ntBASIC8.1□□□□□ -1.11
NEBP20929 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NEBP20929 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC8.1□□□□□ -1.11
NEBP20929 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NEBP20929 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
NEBP20929 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC8.1□□□□□ -1.11
NEBP20929 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
NEBP20929 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
NEBP20929 AC130371.2-201ENST00000619443 611 ntBASIC8.1□□□□□ -1.11
NEBP20929 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NEBP20929 AL353807.1-201ENST00000427475 662 ntBASIC8.1□□□□□ -1.11
NEBP20929 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC8.1□□□□□ -1.11
NEBP20929 SLC25A6P4-201ENST00000586535 553 ntBASIC8.1□□□□□ -1.11
NEBP20929 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
NEBP20929 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
NEBP20929 INGX-201ENST00000359239 846 ntBASIC8.1□□□□□ -1.11
NEBP20929 RPS15-203ENST00000586096 570 ntTSL 2 BASIC8.1□□□□□ -1.11
NEBP20929 GRAMD4P8-201ENST00000605465 1115 ntBASIC8.1□□□□□ -1.11
NEBP20929 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC8.1□□□□□ -1.11
NEBP20929 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC8.1□□□□□ -1.11
NEBP20929 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NEBP20929 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NEBP20929 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC8.09□□□□□ -1.11
NEBP20929 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NEBP20929 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NEBP20929 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC8.09□□□□□ -1.11
NEBP20929 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NEBP20929 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC8.09□□□□□ -1.11
NEBP20929 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC8.09□□□□□ -1.11
NEBP20929 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NEBP20929 AL121956.5-201ENST00000625261 221 ntBASIC8.09□□□□□ -1.11
NEBP20929 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
NEBP20929 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NEBP20929 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC8.09□□□□□ -1.11
NEBP20929 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NEBP20929 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
NEBP20929 RNF152P1-201ENST00000397754 604 ntBASIC8.09□□□□□ -1.11
NEBP20929 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC8.09□□□□□ -1.11
NEBP20929 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC8.09□□□□□ -1.11
NEBP20929 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NEBP20929 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NEBP20929 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NEBP20929 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
NEBP20929 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
NEBP20929 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
NEBP20929 AC106795.1-205ENST00000512851 1056 ntBASIC8.09□□□□□ -1.11
NEBP20929 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC8.09□□□□□ -1.11
NEBP20929 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC8.09□□□□□ -1.11
NEBP20929 AC004264.1-201ENST00000608354 794 ntBASIC8.09□□□□□ -1.11
NEBP20929 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC8.09□□□□□ -1.11
NEBP20929 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC8.09□□□□□ -1.11
NEBP20929 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
NEBP20929 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC8.09□□□□□ -1.12
NEBP20929 HTR5BP-201ENST00000430851 1154 ntBASIC8.09□□□□□ -1.12
NEBP20929 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC8.09□□□□□ -1.12
NEBP20929 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC8.09□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms