Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.78■□□□□ 0.76
NCK1P16333 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC19.78■□□□□ 0.76
NCK1P16333 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
NCK1P16333 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCK1P16333 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCK1P16333 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCK1P16333 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.78■□□□□ 0.76
NCK1P16333 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCK1P16333 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NCK1P16333 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCK1P16333 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCK1P16333 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.78■□□□□ 0.76
NCK1P16333 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.78■□□□□ 0.76
NCK1P16333 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NCK1P16333 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NCK1P16333 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.78■□□□□ 0.76
NCK1P16333 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.77■□□□□ 0.76
NCK1P16333 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCK1P16333 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.77■□□□□ 0.76
NCK1P16333 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCK1P16333 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.77■□□□□ 0.76
NCK1P16333 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCK1P16333 RNF165-205ENST00000588679 2904 ntBASIC19.77■□□□□ 0.76
NCK1P16333 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCK1P16333 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCK1P16333 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
NCK1P16333 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCK1P16333 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCK1P16333 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCK1P16333 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCK1P16333 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCK1P16333 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.77■□□□□ 0.76
NCK1P16333 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCK1P16333 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.77■□□□□ 0.76
NCK1P16333 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NCK1P16333 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCK1P16333 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NCK1P16333 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.77■□□□□ 0.76
NCK1P16333 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NCK1P16333 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NCK1P16333 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NCK1P16333 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.77■□□□□ 0.75
NCK1P16333 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.77■□□□□ 0.75
NCK1P16333 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NCK1P16333 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
NCK1P16333 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCK1P16333 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCK1P16333 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCK1P16333 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.76■□□□□ 0.75
NCK1P16333 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
NCK1P16333 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.76■□□□□ 0.75
NCK1P16333 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
NCK1P16333 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NCK1P16333 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
NCK1P16333 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCK1P16333 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
NCK1P16333 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCK1P16333 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NCK1P16333 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCK1P16333 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
NCK1P16333 AC027702.1-201ENST00000563810 1770 ntBASIC19.75■□□□□ 0.75
NCK1P16333 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCK1P16333 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
NCK1P16333 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.75■□□□□ 0.75
NCK1P16333 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.75■□□□□ 0.75
NCK1P16333 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCK1P16333 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCK1P16333 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.75■□□□□ 0.75
NCK1P16333 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NCK1P16333 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NCK1P16333 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.75■□□□□ 0.75
NCK1P16333 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.75■□□□□ 0.75
NCK1P16333 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC19.75■□□□□ 0.75
NCK1P16333 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
NCK1P16333 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCK1P16333 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCK1P16333 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
NCK1P16333 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
NCK1P16333 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.74■□□□□ 0.75
NCK1P16333 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCK1P16333 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.74■□□□□ 0.75
NCK1P16333 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.74■□□□□ 0.75
NCK1P16333 AP006587.3-201ENST00000525742 1516 ntBASIC19.74■□□□□ 0.75
NCK1P16333 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.74■□□□□ 0.75
NCK1P16333 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
NCK1P16333 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCK1P16333 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.74■□□□□ 0.75
NCK1P16333 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
NCK1P16333 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCK1P16333 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.74■□□□□ 0.75
NCK1P16333 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
NCK1P16333 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
NCK1P16333 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCK1P16333 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCK1P16333 KRT16P3-201ENST00000439127 1283 ntBASIC19.73■□□□□ 0.75
NCK1P16333 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.73■□□□□ 0.75
NCK1P16333 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NCK1P16333 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.73■□□□□ 0.75
NCK1P16333 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.73■□□□□ 0.75
NCK1P16333 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms